Gene PG1724 details

Gene Information

• Locus tag: PG1724
• Symbol: gcp
• ID: 2552462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1813881
• End bp: 1814906
• Gene Length: 1026 bp
• Protein Length: 341 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637150339
• Product: putative DNA-binding/iron metalloprotein/AP endonuclease
• Protein accession: NP_905832
• Protein GI: 34541353
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0533] Metal-dependent proteases with possible chaperone activity
• TIGRFAM ID: [TIGR00329] metallohydrolase, glycoprotease/Kae1 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGAAAG ACATTATCAT ATTGGGGATC GAAAGCTCCT GTGACGACAC CTCTGCAGCC 
GTGGTCAGGA ACGAAACTAT GCTTAGCAAC GTGATCGCGG GACAGGCCGT ACACAAAGCC 
TACGGGGGAG TGGTTCCCGA ACTGGCATCG CGTGCGCATC AGCAGAACAT TGTCCCGGTA 
GTCAGCGAAG CTATCAAACG TGCCGGCATT CGCAAAGAAG AAATTGATGC CATCGCTTTC 
ACTCGTGGAC CGGGTTTGCT GGGATCGCTC CTTGTAGGCA CCAGCTTTGC CAAGGGATTG 
TCTCTTTCAT TGGGCATTCC GATGCTGGAA GTCAATCATC TTCATGCCCA TGTCCTGGCC 
AACTTCCTTC GTGAGCCGGG TGAGGAGTCA CAGCATCCCT CTTTCCCATT CCTGTGCTTG 
TTGGTTTCAG GGGGCAACTC TCAGATTATT CTGGTTCGCT CCCCTTACGA TATGGAGGTA 
ATAGGACAGA CGATCGACGA TGCAGCCGGA GAGGCTTTCG ACAAATGTGC CAAGGTGATG 
GGGTTGGGTT ATCCCGGAGG CCCCATCGTC AATAAGTTGG CTTCCGAGGG CAACCCCGAT 
GCTTTCCGCT TTGCCCGTCC TCATGTGTCC GGTTACGACT ATAGCTTCAG CGGACTCAAG 
ACATCATTCC TCTATACTCT GCGCGACAAA CTGGCCGAAG ATCCCGACTT CATAGAAAAG 
AACAAGGCCG ATCTGTGCGC ATCTCTTCAG CACACGGTCA TAGACATCTT GATGAAGAAA 
CTTCGCCAAG CGGCCAAAGA TCATAGCATC AAACAAGTGG CCTTGGCCGG CGGTGTATCG 
GCCAATACCG GACTGCGCGA TGCTTTTCAT GACCATGCCC GACGTTATGG CTGGACTGTA 
TTCATTCCCA AATTCGCCTA TACAACGGAC AATGCTGCTA TGGTAGCCAT TTCCGGATAC 
TATAAGTACT TGCAGGGCGA TTTCTGCCCC ATCGATGCTG TTCCATTCTC GCGCATCACG 
GTCTGA 

 

Protein sequence

MKKDIIILGI ESSCDDTSAA VVRNETMLSN VIAGQAVHKA YGGVVPELAS RAHQQNIVPV 
VSEAIKRAGI RKEEIDAIAF TRGPGLLGSL LVGTSFAKGL SLSLGIPMLE VNHLHAHVLA 
NFLREPGEES QHPSFPFLCL LVSGGNSQII LVRSPYDMEV IGQTIDDAAG EAFDKCAKVM 
GLGYPGGPIV NKLASEGNPD AFRFARPHVS GYDYSFSGLK TSFLYTLRDK LAEDPDFIEK 
NKADLCASLQ HTVIDILMKK LRQAAKDHSI KQVALAGGVS ANTGLRDAFH DHARRYGWTV 
FIPKFAYTTD NAAMVAISGY YKYLQGDFCP IDAVPFSRIT V