| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1648 |
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| Symbol | |
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| ID | 2552656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1727902 |
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| End bp | 1730142 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637150269 |
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| Product | RelA/SpoT family protein |
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| Protein accession | NP_905769 |
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| Protein GI | 34541290 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAC ACGACAATAC TCTTTTCTCC GCCGATGAGC GGAGTCGCTT CCTCTCCTCA
TACGCGAGTT TGATTCGTAC ACTAGCTCCC GATCGGCAGC TCGTGAAGAA AGTACGCAGT
CTGCTGAGCC GTTTTACGGA GTTGGGATGT TTCGATCGCG ACAAAAACGG TATGCACGGA
CTTTTGCGCA ACATGGAAGT GGCACGCATA GCCTCCTGTG AGATCGGGCT GGGGATAGAG
GCCATCGGAG CACTCCTCTT CTATCGTCCG GCGATGAAGG GGCTGACGAG ACCGGAGGAG
ATAGCCGAGC TCATGGGCGA AGATGTGGCT CGCCTGATCG ACCTCCTGCT GAAAACATCG
GAGATCTACA TGCGCAATAC GGCTATCAAT ACGGCCAACT TCGAGCACTT CCTCCTCTCC
ATCGCCGAAG ATATTCGCGT GGTGCTGCTC ATCATCGCTG ACCGTTCCTA TCTGCTGCGC
CAGGCCAAAG ACATGGTCTG TGCCGAAGAG CGTACGGCCC TGGCTGCAGA GGTGTCTTAT
CTCTATGCTC CGCTGGCACA CAGGCTCGGA CTCTATGCCA TCAAGAGCGA AATGGAAGAC
CTCTGTCTGA AATATACAGA CCGGCAGACT TTCGACTTCA TCAAAAGAAA ACTCGGAGAG
ACGAAGCGTA GCCGCGATGC CTATATCGAA GCTTTCATCG CTCCGCTGCG CCGTCGGCTG
GACGAAGCTC TGCCCAATAT CCCGTACGAG ATGAAGGGGC GTACCAAGAG CATCAACAGC
ATTCGCAACA AGCTTCGTCA GCAGGGTATC GAGTTCGAAT CCATATACGA TCTTTTTGCC
ATACGAATCA TATTGGATGT GCCCGTGAAA GATGAGAAAG CTGCCTGCTG GCATGTCTAT
TCCATCATCA CGGACATGTA TCAGCCCAAT CCACAGCGAA TGAAGGACTG GATCTCCATC
CCCAAAAGCA ACGGTTATGA GTCGCTCCAC GTTACGGTGA TGGGACCGCA GAATCGGTGG
GTGGAGGTGC AGATTCGCTC CCGTCGCATG GACGAGGTGG CCGAAAGAGG ATTGGCTGCT
CACTGGAAGT ACAAAGGTAT CAAGAGCGAG AGCGGATTGG ATGAGTTCCT CACTTCCGTA
CGCGAGACGC TTGAGGCACG CGATCACTCC TCGGACGATT CGGCGGAGAC GGTGAAAAAC
TTCAAGATGA ACCTCTTCAC CGATGAGATC TATGCTTTCA CTCCCACGGG AGAACTGATC
AAGTTGCCTC AGGGAGCCAG TGTGCTGGAC TTTGCTTTTG CCATCCATTC GCGCATCGGC
TGTCAGGCCG TCGGAGCTAA TGTCAATGGA AAGAATGTGC CGCTCAAACA TAAGCTCGAA
AACGGCGACT CCGTTTCGAT CATTACCTCT GCTCAGCAGA CCCCGAAGAA GGATTGGCTT
TCCTATGTGG TCAGTTCCAA AGCACGCAAT AAGATCAAGC AGCAGCTTCG CTTGCAGATG
GAAAGCAGTA TCGGCGTAGT CAAAGAACTG CTGAACCGCC GTCTGAAGAA CCGTAAATTG
CCGTTTGAAG AAGCCGTATT CACGCGCGTG GTACGACGCA AGGGGTTCAA GCATCTGACG
GATTTCTATA TGGAGATAGC GGCCGACAGA CTCGATGTGC AGGAGGTACT GGAGCTATAC
TCTCATGAAT TGGAGGAAGA GCAGAGACGC GATGCCGGTT CGGGTGCAGC TCGTCGCAGT
GCCGATACCT TTGTGGCGCA TCCGCCCAAA GAGGAAGAAA TCGTCAAAGG GGGAAAAAGC
GACGTATTGG TTATCGACAA CAATATGACG GGGGTGGAAT ACAGCTTTGG CAAATGCTGC
AATCCTATTT ACGGGGATTC CGTATTCGGA TTCGTGAGCA ATAGCGGTAT CAAGATACAC
CGCACGGACT GCCCGAATGC GCCGGATATG TTCAGCCGAT ACGGTTATCG CATCATCGAA
GCTCGCTGGA GCGGTAAGGG ATCGACCGGA TACGAGGCTA CACTTCATGT CATAGGACAG
GACAATCTGG CCATCGTGAC GAACATAACT TCGGTCATCA ATAAAGAACC AGGCGTATCG
CTCCGAGCCT ATTCGATCAA TTCGAAGGAC AATCTCTTCG AAGGGGTGTT CACGGTCGAA
GTACCCGATA CCTCGACACT ATCCATCCTC CTTCGCAAGA TCCGTGCTAC GCATGGGGTC
AAGTCGGCCG AACGACATTG A
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| Protein sequence | MTIHDNTLFS ADERSRFLSS YASLIRTLAP DRQLVKKVRS LLSRFTELGC FDRDKNGMHG
LLRNMEVARI ASCEIGLGIE AIGALLFYRP AMKGLTRPEE IAELMGEDVA RLIDLLLKTS
EIYMRNTAIN TANFEHFLLS IAEDIRVVLL IIADRSYLLR QAKDMVCAEE RTALAAEVSY
LYAPLAHRLG LYAIKSEMED LCLKYTDRQT FDFIKRKLGE TKRSRDAYIE AFIAPLRRRL
DEALPNIPYE MKGRTKSINS IRNKLRQQGI EFESIYDLFA IRIILDVPVK DEKAACWHVY
SIITDMYQPN PQRMKDWISI PKSNGYESLH VTVMGPQNRW VEVQIRSRRM DEVAERGLAA
HWKYKGIKSE SGLDEFLTSV RETLEARDHS SDDSAETVKN FKMNLFTDEI YAFTPTGELI
KLPQGASVLD FAFAIHSRIG CQAVGANVNG KNVPLKHKLE NGDSVSIITS AQQTPKKDWL
SYVVSSKARN KIKQQLRLQM ESSIGVVKEL LNRRLKNRKL PFEEAVFTRV VRRKGFKHLT
DFYMEIAADR LDVQEVLELY SHELEEEQRR DAGSGAARRS ADTFVAHPPK EEEIVKGGKS
DVLVIDNNMT GVEYSFGKCC NPIYGDSVFG FVSNSGIKIH RTDCPNAPDM FSRYGYRIIE
ARWSGKGSTG YEATLHVIGQ DNLAIVTNIT SVINKEPGVS LRAYSINSKD NLFEGVFTVE
VPDTSTLSIL LRKIRATHGV KSAERH
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