Gene PG1608 details

Gene Information

• Locus tag: PG1608
• Symbol: mmdB
• ID: 2552847
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 1688775
• End bp: 1689926
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637150237
• Product: methylmalonyl-CoA decarboxylase, beta subunit
• Protein accession: NP_905737
• Protein GI: 34541258
• COG category: [C] Energy production and conversion
• COG ID: [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit
• TIGRFAM ID: [TIGR01109] sodium ion-translocating decarboxylase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCGGAT TCGGCAGCTT CTTAGCAAAC AATATCGAGG TATTCCTCTC TTACACAGGC 
TTCGCCAATG CCACACTCGG CCACTTGGTG ATGATTCTGG TCGGATTGCT ATTCATTTTT 
CTGGCCATAC GGTATGAGTT TGAGCCTATG TTGCTCATTC CGATCGGATT TGGAATCCTC 
ATTGGTAATA TCCCCTTCAA AGATGCCGGT CTGCAGATCG GTATTTACGA AGAAGGATCG 
GTGCTGAATA TCCTCTATCA AGGGGTAACT AAAGGATGGT ATCCGCCACT CATATTTTTG 
GGTATCGGTG CGATGACCGA TTTCTCTGCT CTTATCGCTA ATCCGAAGCT GATGTTGATC 
GGTGCGGCGG CGCAGTTCGG TATCTTCGGT GCCTACATAT TGGCTTTGTA TCTTGGGTTC 
GAACCCAATC AGGCCGGTGC TATCGGTATT ATCGGAGGAG CAGATGGGCC TACGGCTATC 
TTTCTCTCGT CCAAGTTGGC TCCGAACTTG CTGGGTGCCA TTGCAGTCTC TGCATACTCC 
TATATGGCCT TGGTGCCGAT CATCCAACCT CCTATTATGC GTCTTCTGAC CACGAAGAAG 
GAGCGTATGA TTCGGATGAA ACCGCCACGT GCCGTGTCTA CTACGGAGAA GCAGATATTC 
CCGATCGTGG GGCTGCTGCT TACTACTTTT CTTGTGCCTT CGGGTTTGCC CTTGCTGGGA 
ATGCTATTCT TCGGTAATAT TTTGAAAGAA AGCGGTGTTA CTCGCCGTTT GGCTGAGACG 
GCACGTGGCC CGTTGATCGA TGTCATTACC ATTCTTTTGG GCGTTACGGT GGGAGCTTCT 
ACCCAGGCCA CTCAGTTCCT GACATGGAAC TCGATCAAGA TTTTCATTTT GGGAGCTTTC 
TCTTTCATCA TTGCTACGAT GGCCGGTGTT TTGTTCGTGA AGATTCTCAA CCTCTTCTTG 
CGACACAAGC TCAATCCATT GATCGGCAAT GCAGGGGTTT CTGCTGTACC CGACTCTGCA 
CGTATTTCAC AGATCGAAGG CCTAAAGGCC GATCCGACAA ACTACCTGCT GATGCATGCT 
ATGGGACCTA ATGTAGCCGG TGTGATCGGC TCGGCAGTTG CTGCCGGTAT CCTACTCGGA 
TTCCTCGCCT AA 

 

Protein sequence

MTGFGSFLAN NIEVFLSYTG FANATLGHLV MILVGLLFIF LAIRYEFEPM LLIPIGFGIL 
IGNIPFKDAG LQIGIYEEGS VLNILYQGVT KGWYPPLIFL GIGAMTDFSA LIANPKLMLI 
GAAAQFGIFG AYILALYLGF EPNQAGAIGI IGGADGPTAI FLSSKLAPNL LGAIAVSAYS 
YMALVPIIQP PIMRLLTTKK ERMIRMKPPR AVSTTEKQIF PIVGLLLTTF LVPSGLPLLG 
MLFFGNILKE SGVTRRLAET ARGPLIDVIT ILLGVTVGAS TQATQFLTWN SIKIFILGAF 
SFIIATMAGV LFVKILNLFL RHKLNPLIGN AGVSAVPDSA RISQIEGLKA DPTNYLLMHA 
MGPNVAGVIG SAVAAGILLG FLA