Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1495 |
Symbol | topB-2 |
ID | 2553189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1571383 |
End bp | 1573476 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637150139 |
Product | DNA topoisomerase III |
Protein accession | NP_905641 |
Protein GI | 34541162 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0210844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGTA TCATTGCCGA GAAACCCTCG GTCGCCCGCG ACATAGCCCG CATCGTCGGT GCAACGCACA AAGAAGAGGG CTGTTTCTCC GGAAACGGCC ATGTGGTTAC CTGGGCCTTC GGACACCTCG TTACCCTTGC GATGCCCGAA GCATACGGCT TTCCGACGTA CAGCCGCGAG CAACTGCCCA TTATCCCCGA ACCTTTCCGG TTAGTCGTCC GACAGATCCG CAAAGGAACG ACCTATACGG ACGACCCGTC CGCCTTGAAG CAACTCAATA TCATCCGCAA GTGTTTCGAC CGAAGCGATC ACATCATCGT CGCCACCGAC GCCGGACGCG AAGGCGAGTT GATCTTCCGC CTGATCTATG CTTATTTGGA TTGCCGCAAA CCTTTCGACC GCCTGTGGAT CAGCTCCCTC ACCGATAAGG CTATCCGTGA GGGACTGTCC CGTCCGGCTG ACGGCCGGCA GTACGACCGC CTTTATCTCT CGGGCAAGGC TCGCAGTGAA GCCGACTGGC TTGTCGGTAT CAATGCCAGC CGCGCCCTCT CCATCGCTCG CGGAGGCGCT TATTCCCTGG GAAGAGTACA GACACCGACT CTGTCGATGA TTTGCCGCCG CTATATCGAG CACCGGGATT TCCGGTCCGT ACCGTTTTGG AAAATCCATG CGCTGCCCAC CGGCCTCTCC GTCAAGGCCA TCGGAGAAAC GACATACGAA AGCCGCAGAG CAGCGGACAG GGCGATGAAA GATCTGGATC CGCGCGAAGC ACTCATCGTT TCGTCCGTTT CCGTACAAAC GAATCCTGTG CCACCACCTT TACTCTACGA TCTGACTGCC CTTCAGAAAG AAGCCAACAA GCGATACGGA TATACGGCGG AAAAGACGCT CTCTCTGGCC CAAAGCCTGT ACGAGAAAAA GTGTACCACC TATCCCCGTA CAGGCAGCCG GTATATCAGC GAAGACATCT TTGAAGAGAT CCCTTCGCTA TTAGAAAGTC TGAAAGATGA TCCCGATTAT GGCGATTACG TCGAAAAGCT CACTGCCGGT ACACTTAACC GCCGGAGCGT GGACGATACG AAAGTAACCG ACCACCATGC CATTCTCCTT ACCGGAGAAA AGTCCGACAG CCTGACCCGC GACGAAGAGG TGCTCTACCG AATGGTCACC GTGCGTATGC TGGAATCCTT TTCCGAAGCG GCCATCGAAG AAACGCTGAC GGCGATACTC TCTCAAAGGG AGCATCGTTT CGGGATAAAG GCGAAGAGAC GGGTTAAGTC GGGCTGGAAA GCCATCCGCG GATCGATGGA AGAGCCTGTA GAAGAAGGAG AAACCGTTGT GGACAGCTTT CCCGAATGGC AGGAAGGCGA CCGGCTCGAT GTTTTCGGAT TCGAAATGAC CGAACATCAA ACAAAGCCCA AGCCCCTTTA TACGGAAGCC ATGTTGCTGT CGGCCATGGA GCACGCCGGA CGGGAAGTTG CGGACGAAGA AGCCCGCAAA GCCCTCGCCG GTTGCGGCAT CGGTACGCCT GCCACACGTG CGGCCATCAT CGAGACATTG ATCCTGCGAG AATATATCCG CCGGGAGAAG AAGATGCTTA TCCCGACCGA AAAAGGTCTT TCCGTCTATA AACTGGTCGC CGGACGAAAG ATCGCCGACG CCGAAATGAC GGGAGCATGG GAAGTCGCTC TGGCTGCCAT TGAAGCAGGC GCCATGGACG AACGGACATT CGGGAAGAGC ATCGAAGTTT ATACCCGTCA AATATGCGAA GAACTGCTGA CGACAGCCGC CGGAAACACG GATGCTCATT ACAAAACTTA CCGCTGCCCG CTATGCGGGA ACGATTCGGT ACGGGTGTTT CCCAAAATCG TCAAATGCGT AACGGATGGT TGTGGGTTCA AAGTCTTCCG GGAGCTTTGC GGCACCCTCC TGAGCAAGGA ATATATTCAT GCCCTGATGA CTGACGGATG CACTCCGCTA CTCTGTCGGC TGACCGGCAA ATCGGGAAAA ACCTTCAATG CCCGCCTGAA GCTCGACAAA GATGGCGGCA CCTCCTTCGT CTTCGATTCC AAACCCCGTA AACCTCAAAC ATAA
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Protein sequence | MKCIIAEKPS VARDIARIVG ATHKEEGCFS GNGHVVTWAF GHLVTLAMPE AYGFPTYSRE QLPIIPEPFR LVVRQIRKGT TYTDDPSALK QLNIIRKCFD RSDHIIVATD AGREGELIFR LIYAYLDCRK PFDRLWISSL TDKAIREGLS RPADGRQYDR LYLSGKARSE ADWLVGINAS RALSIARGGA YSLGRVQTPT LSMICRRYIE HRDFRSVPFW KIHALPTGLS VKAIGETTYE SRRAADRAMK DLDPREALIV SSVSVQTNPV PPPLLYDLTA LQKEANKRYG YTAEKTLSLA QSLYEKKCTT YPRTGSRYIS EDIFEEIPSL LESLKDDPDY GDYVEKLTAG TLNRRSVDDT KVTDHHAILL TGEKSDSLTR DEEVLYRMVT VRMLESFSEA AIEETLTAIL SQREHRFGIK AKRRVKSGWK AIRGSMEEPV EEGETVVDSF PEWQEGDRLD VFGFEMTEHQ TKPKPLYTEA MLLSAMEHAG REVADEEARK ALAGCGIGTP ATRAAIIETL ILREYIRREK KMLIPTEKGL SVYKLVAGRK IADAEMTGAW EVALAAIEAG AMDERTFGKS IEVYTRQICE ELLTTAAGNT DAHYKTYRCP LCGNDSVRVF PKIVKCVTDG CGFKVFRELC GTLLSKEYIH ALMTDGCTPL LCRLTGKSGK TFNARLKLDK DGGTSFVFDS KPRKPQT
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