Gene PG1417 details

Gene Information

• Locus tag: PG1417
• Symbol: fumB
• ID: 2551692
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1501435
• End bp: 1503081
• Gene Length: 1647 bp
• Protein Length: 548 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637150069
• Product: fumarate hydratase class I, anaerobic
• Protein accession: NP_905572
• Protein GI: 34541093
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
• TIGRFAM ID: [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.70407
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAACTC CAGAATTTAA GTATCAGAAG CCTTTCCCTA TGGGGGATGA TACGACAGAG 
TATTATTTGC TGACGAAGGA GTATGTGTCC GTGGACAAGT TTGGCGATCA TGATGTCCTG 
AAAGTGGAGC CGGAAGCTCT GCGATTACTT GCGCGGACGG CTTTTCATGA CATCGCTTTC 
TATTTGCGAC CGGAGCATCA GCAGCAAGTG GCTCGGATTC TGTCCGATCC GGAAGCCAGC 
GAAAACGACA AATTCGTGGC TTTGACTTTC CTGCGCAATG CGGAGGTTTC AGCCAAGGGA 
CAGCTCCCTT TCTGCCAAGA TACGGGCACG GCTATCATCC TCGGTAAGAA GGGACAGCAG 
GTCTGGACGG GCGGTCATGA CGAAGAGCAG CTCTCGCATG GTGTCTATGA TACCTATACG 
CAGGAGAACC TGCGCTATTC GCAGAATGCT CCTTTGGATA TGTATAAGGA GGTGAATACG 
GGGTGCAACC TGCCCGCACA GATCGACCTG ATGGCCGTGG ACGGCATGGA GTACGACTTT 
CTCTGCATAG CCAAAGGAGG AGGGTCGGCC AATAAGACGT ATCTCTATCA GGAAACGAAA 
GCACTGCTCA ACCCCAAGAC GCTGGTGAAC TTCCTCGTGG ATAAGATGAG TTCTCTCGGT 
ACAGCTGCCT GTCCTCCGTA TCACATTGCA TTCGTGATAG GCGGAACTTC GGCCGAAACG 
AACCTCAAGA CCGTCAAGCT GGCTTCGGCC AAGTACTACG ACAATCTGCC TACTTCGGGC 
AACGAAGGCG GGCGTGCCTT CCGCGATGTC GAACTGGAAA AAGAAGTCTT GGAAGCTGCC 
TATCATCTGG GACTGGGTGC TCAGTTTGGA GGCAAATACT TCGCACACGA CGTGCGCATC 
ATCCGCCTGC CCCGACATGG AGCAAGCTGT CCCGTAGGTA TGGGCGTCAG TTGTTCGGCA 
GACCGCAATA TCAAGGCAAA GATCAATAAA GACGGTATCT GGATCGAAAA GATGGAGACC 
AATCCCACAC GCCTCATCCC TGAATCCATG CGTGAGGGTA CAGAGGGTAC GGTGGTCAAG 
GTCGATCTGA ATCGTCCGAT GCCTGAGATT CTGAGAGAGC TGTCGCAGTA TCCTGTTTCC 
ACCCGTTTGT CTCTCAGTGG TACGATTATC GTGGGGCGTG ATATTGCTCA CGCCAAACTA 
AAAGAACGTA TCGACCGTGG CGAGGGTTTG CCCGACTATA TCAAGAATCA TCCCATCTAC 
TACGCCGGTC CGGCCAAGAC ACCGAAGGGG ATGCCGAGCG GTTCGTTCGG GCCTACGACA 
GCGGGCCGTA TGGATAGCTA TGTGGATCTC TTCCAATCGC ATGGAGGCAG TATGGTGATG 
ATAGCCAAAG GCAACCGCTC TCAGCAAGTG ACGGATGCGT GTAAGAAGTA CGGCGGATTC 
TACCTCGGCA GTGTTGGAGG CCCAGCAGCT ATTCTGGCTC AGGACAGCAT TAAGAAAGTG 
GAGTGTCTGG AATATCCCGA GCTGGGTATG GAGGCTATTT GGAAGATCGA AGTGGAGGAC 
TTCCCGGCCT TTATTCTGGT AGATGACAAG GGCAATGATT TCTTTACTCA GATAAGAGAG 
AAGTGTAAGG GTTGTGCCTT GCATTGA 

 

Protein sequence

MATPEFKYQK PFPMGDDTTE YYLLTKEYVS VDKFGDHDVL KVEPEALRLL ARTAFHDIAF 
YLRPEHQQQV ARILSDPEAS ENDKFVALTF LRNAEVSAKG QLPFCQDTGT AIILGKKGQQ 
VWTGGHDEEQ LSHGVYDTYT QENLRYSQNA PLDMYKEVNT GCNLPAQIDL MAVDGMEYDF 
LCIAKGGGSA NKTYLYQETK ALLNPKTLVN FLVDKMSSLG TAACPPYHIA FVIGGTSAET 
NLKTVKLASA KYYDNLPTSG NEGGRAFRDV ELEKEVLEAA YHLGLGAQFG GKYFAHDVRI 
IRLPRHGASC PVGMGVSCSA DRNIKAKINK DGIWIEKMET NPTRLIPESM REGTEGTVVK 
VDLNRPMPEI LRELSQYPVS TRLSLSGTII VGRDIAHAKL KERIDRGEGL PDYIKNHPIY 
YAGPAKTPKG MPSGSFGPTT AGRMDSYVDL FQSHGGSMVM IAKGNRSQQV TDACKKYGGF 
YLGSVGGPAA ILAQDSIKKV ECLEYPELGM EAIWKIEVED FPAFILVDDK GNDFFTQIRE 
KCKGCALH