Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1402 |
Symbol | |
ID | 2551736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1485121 |
End bp | 1486053 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637150058 |
Product | AP endonuclease domain-containing protein |
Protein accession | NP_905561 |
Protein GI | 34541082 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.326174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTATAT ATTGGGTACT GCGAGGCAAG ATTGTTTGGT TTATAGGAAA TGCCCTTTTG TTGCTTTTCA CATGGGGCAC CATCGACACT TATATACCGC TGCATCGAAA GATAAAAGAG TCCTCGATTC CGCAGTCGCG TATCAAGGTG ATGACCTATA ACGTCAAGGG ATTCGATTTT CGTGCTCACA ATTCAGAGAA TCCCAATCCT ATTCTCAAAT ATATCAAAGG AAGTGGAGCC GATATCGTAT GCTTGCAAGA GGCAGTACTG AGTCGGAAAA GCAACTCTCG TTATGTGGGG CTACGTACTT TCAAGAAATA TCTTCCCGAA TATCGCTACA TGGAACTGTC GCATGCTCGA GAAGATAGAA AAGGCAGCGG CCTTATGCTC CTGTCCAAAT ATCCCATTCT CGATGTGCAC CGCATCCCAT ACGAGTCCGC ATTCAATGGC TCCACAGCCT ACACCGTTGA TATACAGGGG CGAAAAGTCC TTGTCGTGAA CAATCACTTG GAAAGTTTCC GCTTGACAAT GGCAGATGGG ACGGAATATC TGAAAATGGT GCGGGAAGGG GAGGCAGCGG CTCTCAGTCG GATGATGACG GCCAAGATGG GGCCGGCCTA TGCTCTGCGT GCCGTTCAGG CTGATTCAGT GAGCCATTAT ATCCGGTGCT CGGAATCTGA GCACGTGATC GTATGCGGTG ACTTTAACGA TACCCCCATA TCATATGCTC GCCATAAAAT AGCATCGGGC CTGAAAGATG CGTATTCTGA TACGGGGCGT GGCCCGGGCT TTACTTTTAA TCAGGGAGCT TTCAAGGTAC GTATCGATCA TATCCTCTAT TCTTCAGGTT TTCTGGCATA TAACTGTACG GTAGACAAGT CGGTCCATGC TTCGGATCAC TTTCCGGTTT GGTGCTACCT GGTCTTCAAA TAG
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Protein sequence | MVIYWVLRGK IVWFIGNALL LLFTWGTIDT YIPLHRKIKE SSIPQSRIKV MTYNVKGFDF RAHNSENPNP ILKYIKGSGA DIVCLQEAVL SRKSNSRYVG LRTFKKYLPE YRYMELSHAR EDRKGSGLML LSKYPILDVH RIPYESAFNG STAYTVDIQG RKVLVVNNHL ESFRLTMADG TEYLKMVREG EAAALSRMMT AKMGPAYALR AVQADSVSHY IRCSESEHVI VCGDFNDTPI SYARHKIASG LKDAYSDTGR GPGFTFNQGA FKVRIDHILY SSGFLAYNCT VDKSVHASDH FPVWCYLVFK
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