Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1318 |
Symbol | |
ID | 2551636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1397292 |
End bp | 1397858 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637149988 |
Product | ECF subfamily RNA polymerase sigma factor |
Protein accession | NP_905491 |
Protein GI | 34541012 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATA AGCTATTGAT TTCGGAAGAA GAGTTGCTGG AAGAGCTGAG AGATCCGGCA AGGCGGCGTA TGGCCTTTGA AAAGGTAGTA CGCCTGTACA ACCGTAAACT CTACTGGCAA ATCCGCCGAA TGGTGCTCAG TCATGACGAT ACGGACGACT TGCTCCAAAA TACCTTTATG AAGGCATGGA GTGCATTGGA CGGTTTTCGT GGGGAGGCCA AACTCTCCAC CTGGCTCTAT CGGATAGCCA TGTACGAATC ACTCAATTTC CTGAAGAAGA AAAAGATCGA AGACGATATG AGTATATCGA TCACGGACGA AAACTCCTAT CTGCTCGACA ACCTCACGGG GGATGTTTAT TTCGATGGAG ATGAAGCCGA GATTACCTTC CAAAAGGCTA TACTGGAATT GCCTGATAAA CAGCGGTTGG TGTTCAACCT TCGGTACTAC GATGAGATGC CTTACGAAAA AATGGCCGAA ATCACCGGTA CCTCGGAAGG TGCTCTCAAG GCATCGTACC ACCATGCTGT GAAGAAGTTG GAGCGTTTTT TGTCGCCCGA TGATTAA
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Protein sequence | MADKLLISEE ELLEELRDPA RRRMAFEKVV RLYNRKLYWQ IRRMVLSHDD TDDLLQNTFM KAWSALDGFR GEAKLSTWLY RIAMYESLNF LKKKKIEDDM SISITDENSY LLDNLTGDVY FDGDEAEITF QKAILELPDK QRLVFNLRYY DEMPYEKMAE ITGTSEGALK ASYHHAVKKL ERFLSPDD
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