| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1305 |
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| Symbol | gcvP |
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| ID | 2551882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 1383761 |
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| End bp | 1386628 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637149975 |
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| Product | glycine dehydrogenase |
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| Protein accession | NP_905479 |
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| Protein GI | 34541000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTA ACAAATTCGA AAACCGCCAT ATTGGTATTG CCGAGCGCGA CCTCTCCGTC
ATGCTCCGGA CCATAGGCGT AGAGTCAATG GATCAGCTGA TCCGCGAAAC GATCCCCGGC
GACATTCTGC TGCCCGAGCC TCTCGATTTG CCCGAAGCCA TGACCGAGCG CGAACTGCTC
GAACATTTCA TGGAACTGGG ATCCAAGAAC AAGATCTTCA CCTCCTACAT CGGACAAGGC
TGGTATGATA CGGTCACGCC GGCTCCCATC CAGCGCAACG TATTGGAGAA TCCTGCGTGG
TACACCTCCT ATACGCCTTA TCAGGCGGAA GTATCACAGG GGCGTCTGGA GGCTCTCTTC
AATTTCCAGA CGGTGATCAC CGAACTGACG GGGCTGCCCT TGACGAACTG CTCGCTCCTC
GACGAAGCCA CTGCCGGTGC CGAAGCTGCA CGTATGTTCT TCGATACCCG TTCGCGCACA
CAAATCAAGG CTGGTGCCAA CGTTCTCTTC GTGGACAAGA AGGTATTCCG CTCTACGATC
GAAGTGATCC GCACCCGTAT CATACCTCAG GGTATGCAGA TCGTGGTGGA TGACTACAAG
ACATTCAGCT TCACACCCGA AGTATTTGCT GCCATCGTAC AGTTCCCCGA TGCAGAAGGA
TCTGTCAATG ATTATAAATC ATTCATCGAA GCGGCTCATG CTGCCAATGC CAAAGTAGCC
GTAGTAGCCG ACCTCTTGAG TATGACCATC CTGACTCCTC CGGGAGAATG GGGGGCCGAT
ATCGTATTCG GATCGGCACA GCGTTTCGGT ATTCCCATGT ATTACGGCGG CCCGTCAGCA
GGATATTTGG CTACGAGTAT GGACTACAAA CGCAACATCC CCGGCCGTAT TATCGGTATG
TCCAAAGATG CTTACGGACG TCCGGCTTAT CGTCTGGCAT TGCAAACGCG CGAACAGCAC
ATCAAACGAG AGAAAGCCAC ATCGAATATC TGTACCGCAC AAGCTTTGTT GGCTACGATG
AGCAGCTTCT ATGCCGTGTA TCACGGTGCC GATGGCTTGC GCCACATAGC CGGCAGGGTA
CATGCTTATG CAGGATTTAT CAGCGAGAAG CTCTCCGGAC TCGGTTATAA GCTGACAAAT
AAGGACTTTT TCGACACGCT TCGTGTGGAG CTGCCGGCCG GTGTCACAGC AGACAAAGTA
CGCGAACTGG CCGAAGAATG CAGCGTAAAC TTCTTCTACC CTGCCGATGG CAGCATCCTG
ATCAGTTTGG ACGAGACTAC ACTGCCGTCC GACCTCGGTG TTCTGCTCTA TATCTTCTCA
TCCGTTTTGG GCAAAGAGGA GACAATCTCG GAGGACATTG CCATCGACAA ACGGTATTTC
GACGGTGCCT TTGCCCGTAC CTCGAACTTC CTGGACTACG ACGTATTCAA CAACTACCAC
ACCGAGACGG AGCTGATGCG CTACATCAAA CGCCTCGAAC GCAAGGACAT TTCACTGGCA
CACTCCATGA TTCCGCTGGG TTCTTGTACG ATGAAGCTGA ATGCCGCATC CGAGCTGTTC
AACCTCTCGA TGCCGCAGTT CAATGCCATT CACCCGTATG CTCCGAAAGA CCAGACGGAA
GGCTACAACG AGATGCTCGA AAGCCTCGAA CGTTACTTGG CCGTTATCAC CGGTTTCGAT
GCCACTTCGC TCCAACCTAA CTCCGGTGCA GCAGGCGAAT ACACCGGATT GCTCACTATT
CGCGGCTATC TGAACAGCAT CGGACAGGGA CACCGCCATC TGGTTATCCT GCCGGCTTCT
GCCCACGGTA CCAATCCGGC CAGTGCCATC CAGTGCGGAT ACGATACGGT GACGGTAGCT
TGCGACGAGC GAGGCAACGT AGATATGGAG GACTTCATGG CCAAGACCGA ACAGCACAAG
GACGAAATCG CTGCCATGAT GATTACCTAC CCGAGTACGC ACGGTATCTT CGAGACGAAC
ATTATCGATC TTTGCCATCG CATCCACGAG TGTGGAGGTC AGGTGTATAT GGACGGTGCC
AACATGAACG CTCAGGTAGG ACTGACCAGT CCGGGCTTCA TCGGAGCAGA CGTGTGCCAT
TTGAATCTGC ACAAGACCTT TGCTATCCCC CACGGAGGTG GAGGTCCGGG TGTAGGTCCT
ATCTGTGTGG CCAAGCACTT GACTCCATTC CTGCCATCGC ACCCGCTGCG TGAGGACTAC
AACGGCTTGG AAGTATCCGC TGCTCCATAC GGAAGTGCAG GGGTAACGAC TATCACCTAT
GCTTACATTC GTCTGATGGG ATACGAAGGT CTGCGCAGAG CTACGAAAAT CGCCATCCTG
AACTCCAACT ACATGGCTAA CCGTCTGAAG GATACTTTCG GTATCGTCTA TACGGGAGCC
ACGGGTCGCA TAGGTCATGA GCTGATCCTC GAATGTCGCA AGATCAAAGA AAGCGGTATC
GACGAGAACG ATATAGCCAA GCGTCTGATG GACTTCGGCT ATCACGCTCC GACGCTCTCT
TTCCCCGTAC ATGGCACTCT GATGATAGAG CCGACAGAGA GCGAGAGCCT GGCCGAGCTG
GATCGTTTCA TCGATGTGAT GAACTGTATC TGGGAAGAGA TACAGGAAGT GGCTCGTGGC
GAACAGGAAG CTACCGACAA CGTATTGAAG AATGCTCCGC ATCCTCAATA CGAGGTGACG
GCTAACGACT GGTCGCATCC GTACTCTCGC GAAAAGGCAG CTTATCCGCT GGAATACCTG
CGTGAGAATA AGTTCTGGCT CAACGTAGCC CGTATCGACA ACGGCTATGG CGACCGCAAT
TTGGTTCCGA GCCTCTGCAG CGCATGTGAG GTTTTCAACA ATCAATAG
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| Protein sequence | MNTNKFENRH IGIAERDLSV MLRTIGVESM DQLIRETIPG DILLPEPLDL PEAMTERELL
EHFMELGSKN KIFTSYIGQG WYDTVTPAPI QRNVLENPAW YTSYTPYQAE VSQGRLEALF
NFQTVITELT GLPLTNCSLL DEATAGAEAA RMFFDTRSRT QIKAGANVLF VDKKVFRSTI
EVIRTRIIPQ GMQIVVDDYK TFSFTPEVFA AIVQFPDAEG SVNDYKSFIE AAHAANAKVA
VVADLLSMTI LTPPGEWGAD IVFGSAQRFG IPMYYGGPSA GYLATSMDYK RNIPGRIIGM
SKDAYGRPAY RLALQTREQH IKREKATSNI CTAQALLATM SSFYAVYHGA DGLRHIAGRV
HAYAGFISEK LSGLGYKLTN KDFFDTLRVE LPAGVTADKV RELAEECSVN FFYPADGSIL
ISLDETTLPS DLGVLLYIFS SVLGKEETIS EDIAIDKRYF DGAFARTSNF LDYDVFNNYH
TETELMRYIK RLERKDISLA HSMIPLGSCT MKLNAASELF NLSMPQFNAI HPYAPKDQTE
GYNEMLESLE RYLAVITGFD ATSLQPNSGA AGEYTGLLTI RGYLNSIGQG HRHLVILPAS
AHGTNPASAI QCGYDTVTVA CDERGNVDME DFMAKTEQHK DEIAAMMITY PSTHGIFETN
IIDLCHRIHE CGGQVYMDGA NMNAQVGLTS PGFIGADVCH LNLHKTFAIP HGGGGPGVGP
ICVAKHLTPF LPSHPLREDY NGLEVSAAPY GSAGVTTITY AYIRLMGYEG LRRATKIAIL
NSNYMANRLK DTFGIVYTGA TGRIGHELIL ECRKIKESGI DENDIAKRLM DFGYHAPTLS
FPVHGTLMIE PTESESLAEL DRFIDVMNCI WEEIQEVARG EQEATDNVLK NAPHPQYEVT
ANDWSHPYSR EKAAYPLEYL RENKFWLNVA RIDNGYGDRN LVPSLCSACE VFNNQ
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