Gene PG1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1221 
Symbol 
ID2552113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1298269 
End bp1298994 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content51% 
IMG OID637149901 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionNP_905412 
Protein GI34540933 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.810471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCA AACGAATCGT TGTCGTAGGA GCCACCTCTG GCATCGGGCT TGATGTAGCC 
CGCCTATTTA TCTCTCGCGG TTGGTTCGTA GGTGTTGCCG GCCGCAATAC CCAAATGCTC
GATGCATTGA AGCAGGAGAA TCCCTCACAG GTTTATACAG CCGTAATAGA CATCACGCAT
TCCGATGCTC CTGAACGGCT GTCCCACCTC ATCGAAGAAA TGAGCGGTAT GGATGTATAC
TTCCACTCGT CCGGTATCGG TTATAACAAT CCGCAACTGG ACGAAACGAA AGAGCTGGAC
ACCCTCCGTA CCAATGGAGA AGGATTTACC CGAATGATCG GTGCCGCCTA CCGCTATTTT
CGCCTTCGGA AAAAGGGTCA AATAGTAGCC ATCAGTTCGG TAGCAGCAAC AAGAGGAATG
GGATCCGCTC CTGCCTACTC CGCCACCAAA CGCTTCCAAA TGCACTATCT CCAATCCATA
CGCCAATTGG CCACGACAGA CAGCCTACAC CTGACCGTTA CGGAGATTCG TCCCGGATTT
GTCGATACCC CCCTGCTACG AGACGGTAAG TATCCAATGC TGATGGAGTC CAAGATAGTT
GCCCAAGCAA TAGTAAAGGC TGTCATCCGT CGAAAAAGAC TGCTGACTTT CGACTGGCGC
TATCGTTTAC TGGTCGCTTT CTGGCGTATG ATCCCCGTTC GAATATGGGA GAAAACAAGA
GTATAA
 
Protein sequence
MEAKRIVVVG ATSGIGLDVA RLFISRGWFV GVAGRNTQML DALKQENPSQ VYTAVIDITH 
SDAPERLSHL IEEMSGMDVY FHSSGIGYNN PQLDETKELD TLRTNGEGFT RMIGAAYRYF
RLRKKGQIVA ISSVAATRGM GSAPAYSATK RFQMHYLQSI RQLATTDSLH LTVTEIRPGF
VDTPLLRDGK YPMLMESKIV AQAIVKAVIR RKRLLTFDWR YRLLVAFWRM IPVRIWEKTR
V