Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1221 |
Symbol | |
ID | 2552113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1298269 |
End bp | 1298994 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637149901 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | NP_905412 |
Protein GI | 34540933 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.810471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCA AACGAATCGT TGTCGTAGGA GCCACCTCTG GCATCGGGCT TGATGTAGCC CGCCTATTTA TCTCTCGCGG TTGGTTCGTA GGTGTTGCCG GCCGCAATAC CCAAATGCTC GATGCATTGA AGCAGGAGAA TCCCTCACAG GTTTATACAG CCGTAATAGA CATCACGCAT TCCGATGCTC CTGAACGGCT GTCCCACCTC ATCGAAGAAA TGAGCGGTAT GGATGTATAC TTCCACTCGT CCGGTATCGG TTATAACAAT CCGCAACTGG ACGAAACGAA AGAGCTGGAC ACCCTCCGTA CCAATGGAGA AGGATTTACC CGAATGATCG GTGCCGCCTA CCGCTATTTT CGCCTTCGGA AAAAGGGTCA AATAGTAGCC ATCAGTTCGG TAGCAGCAAC AAGAGGAATG GGATCCGCTC CTGCCTACTC CGCCACCAAA CGCTTCCAAA TGCACTATCT CCAATCCATA CGCCAATTGG CCACGACAGA CAGCCTACAC CTGACCGTTA CGGAGATTCG TCCCGGATTT GTCGATACCC CCCTGCTACG AGACGGTAAG TATCCAATGC TGATGGAGTC CAAGATAGTT GCCCAAGCAA TAGTAAAGGC TGTCATCCGT CGAAAAAGAC TGCTGACTTT CGACTGGCGC TATCGTTTAC TGGTCGCTTT CTGGCGTATG ATCCCCGTTC GAATATGGGA GAAAACAAGA GTATAA
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Protein sequence | MEAKRIVVVG ATSGIGLDVA RLFISRGWFV GVAGRNTQML DALKQENPSQ VYTAVIDITH SDAPERLSHL IEEMSGMDVY FHSSGIGYNN PQLDETKELD TLRTNGEGFT RMIGAAYRYF RLRKKGQIVA ISSVAATRGM GSAPAYSATK RFQMHYLQSI RQLATTDSLH LTVTEIRPGF VDTPLLRDGK YPMLMESKIV AQAIVKAVIR RKRLLTFDWR YRLLVAFWRM IPVRIWEKTR V
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