Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1175 |
Symbol | |
ID | 2553258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1254260 |
End bp | 1255966 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637149865 |
Product | ABC transporter, ATP-binding protein, putative |
Protein accession | NP_905376 |
Protein GI | 34540897 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATACGAT ATTTCCAACA CCGATTCGCT CTCTCTCGTA AGGGTGCGCA GGATCTTGCC AAAGGCATTG CATGGACTAC GGTTTTGAAT GTCGGATTTA TGTTGCCTGC CATATTCACT TTTCTTTTCC TCGAAGACTA TCTGCAAGGA TCCGCCACAC ATGGTATTTG GTATTATATA GCCATGGGAG CGGCTTTTAT GGCGGTGCTC TTCGTTATAG CTCTCTTCCA ATACACAAGC CTGTACACCA AGATATATAC AGAGAGTGCC AACCGCCGCA TCGCCTTGGC TGAAAAACTA CGCAAACTCC CATTGGCTTT CTTCGGAGAG AAGAATCTGT CCGATCTGAC TTCCACGATG ATGGAGGATA GTACGGTGAT GGAGACTGTC TTCTCTCACA GTATACCCCA GCTCTTTGCA TCGTTGGTCA GTCTCTTTTT GATCGGTATA GGGCTCTTCT GCTATAATTG GCAGCTTTCG TTGGCACTCT TTTGGGTTGT GCCTGTAGCA GCCTTAGCAA TTGTCTTTTC CAAAAAGATG TTGAACAAAT CATTCCACTC GAACTACCAT GTCAAACGAG AGGTCACCGA GCATATACAG GAAGGAATCG AAGAGATACA GGAGATAAAA TCATATAATG GCGAAGAAGA ATTTGCCGAG CGCTTCGATG CCAAACTCCA TGCCTATGAG AAGAGCCTTA TTCGATGTGA ACTTGTTGTC GGTGCCGTCC TTAATGCTTC ACATATAATC CTCAAACTGG GACTTGCCTC TGTAATCATA ATGGGAGCTT ATCTCTTGTC AGAAGGAACA ATTGATCTAT TCACTTATTT AGTCTTTCTG CTTATCGGAT CGAGCATATA TAATCCCATA AGTGAAGTAT TCAGCAATTT GCTACTCTTG CAGTACCTCG ATGTACGTAT CGATCGGGTG AGAGAGATGG ATGCTATGCC GATACAGGAA GGTAAAACGG ACTATTCTGT CCGGAACTTC GATATTATAT TCCAAAACGT AAATTTCTCC TACGAAAAGG GGAAGCAAGT ACTGCGCAAT GTATCGTTCA CGGCCAAACA AGGAGAAGTC ACAGCCCTCG TCGGTCCGTC GGGTGGAGGA AAGAGCACAT CGGCCAAGTT GGCTGCACGC TTTTGGGATA TAGATGGAGG AAAGATCTTT TTGGGAGGGG AAGACATTTC GCAAATCGAA CCCGAAACCC TGCTACGTCA TTATGCCATC GTCTTCCAAG ATGTACTGCT CTTCAATGCA TCGGTGGCCG ATAATATCCG CATAGGTAAA CCTGATGCTA CAGATGAAGA GCTCAAACGT GTAGCTCGGT TGGCAAGATG CGACGAATTT GTAGATCGTC TGCCGAATGG ATATGACACT TTGATCGGTG AAAATGGTGA GAACCTTTCA GGAGGTGAAC GTCAGCGCAT TTCTATAGCC AGAGCTTTAC TCAAGGATGC TCCGATTGTG CTGCTGGATG AAGCTACGGC AAGTCTCGAT GTTGAGAATG AGACACTGAT ACAGGCCGGT ATATCCGAAC TGATCAAAAA CAAGACAGTC CTCATTATCG CTCATCGTAT GCGCACTGTA GCCAATGCCC ATAAGATTGT TGTACTCAAA GAAGGGACTG TAGCCGAATG TGGCAGTCCG GCCGAATTGA TGGCCATGAA CGGTGTGTTT GCTCGAATGG TGGCGGCGCA GAAGTAA
|
Protein sequence | MIRYFQHRFA LSRKGAQDLA KGIAWTTVLN VGFMLPAIFT FLFLEDYLQG SATHGIWYYI AMGAAFMAVL FVIALFQYTS LYTKIYTESA NRRIALAEKL RKLPLAFFGE KNLSDLTSTM MEDSTVMETV FSHSIPQLFA SLVSLFLIGI GLFCYNWQLS LALFWVVPVA ALAIVFSKKM LNKSFHSNYH VKREVTEHIQ EGIEEIQEIK SYNGEEEFAE RFDAKLHAYE KSLIRCELVV GAVLNASHII LKLGLASVII MGAYLLSEGT IDLFTYLVFL LIGSSIYNPI SEVFSNLLLL QYLDVRIDRV REMDAMPIQE GKTDYSVRNF DIIFQNVNFS YEKGKQVLRN VSFTAKQGEV TALVGPSGGG KSTSAKLAAR FWDIDGGKIF LGGEDISQIE PETLLRHYAI VFQDVLLFNA SVADNIRIGK PDATDEELKR VARLARCDEF VDRLPNGYDT LIGENGENLS GGERQRISIA RALLKDAPIV LLDEATASLD VENETLIQAG ISELIKNKTV LIIAHRMRTV ANAHKIVVLK EGTVAECGSP AELMAMNGVF ARMVAAQK
|
| |