Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1118 |
Symbol | clpB |
ID | 2553313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 1192173 |
End bp | 1194764 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637149817 |
Product | clpB protein |
Protein accession | NP_905329 |
Protein GI | 34540850 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTA ACAACTACAC AATCAAATCG CAGGAGGCTC TACAGCAGGC TGTGGAGCTG ACCCGTCGGC ACGGACAGCA GGCCATCGAA CCGCAGCACC TGCTCAAGGC CGTTATGGAT CAGGGCGAAA GCCTGACCGA TTTCCTTTTT GCCAAGATGG GGCTGAACAA GGGCAGTATC GCCACGGCTG TGGACAAACT GATAGAGAAA CTGCCCCATG TATCGGGTGG CGAACCCTAT CTGTCGCATG AGACCAATCA GGTGCTACAG GCAGCGGAGG ACGCAGCGCA CCGGATGAAG GACAAATACG TCTCTTTGGA GCACATCGTG CTGGCTATTC TGACTACGCG ATGCGAGGCG TCCACTCTGC TCAAGGATGC CGGAGCCACC GAACAGCTTC TGCAGTCGGC CATCGAAGAG CTTCGGAAGG GGCGCAACGT GACCAGTCAG AGTGCGGAGG AACAGTACAA TGCACTGGAG AAATATGCCG TCAATCTCTG TCAGCGTGCT CGCGATGGCA AGTTGGATCC CGTGATCGGT CGCGATGACG AGATCAGGCG AGTGCTGCAA ATTCTCTCTC GACGCACCAA GAACAATCCT ATCCTTATCG GTGAGCCGGG GGTGGGCAAG ACGGCCATAG CCGAGGGCTT GGCTTACAGG ATCGTGCGTG GCGACGTGCC GGAGAATCTG CGCAACAAGC AGATATTCTC TCTCGACATG GGTGCCTTGA TCGCCGGAGC CAAATACAAA GGTGAATTCG AGGAAAGGCT GAAAGCCGTG GTAAACGAAG TGACCGGTGC CGAGGGGGAA ATCATCCTTT TCATAGATGA GATCCACACC CTTGTCGGAG CCGGCAAGAG CGAAGGCGCG ATGGACGCTG CCAACATACT GAAGCCGGCC CTGGCTCGGG GCGAACTCCG TGCCATCGGT GCCACCACGC TGGACGAATA CCGCAAATAC TTCGAGAAGG ACAAGGCTCT GGAACGACGC TTCCAGATGG TGATGGTGGA CGAGCCGGAC GAGCTAAGCT CCATCTCCAT CCTCCGGGGT TTGAAGGAGA AATACGAGAA TCACCACAAA GTGCGGATCA AGGATGATGC CATCATTGCG GCCGTGAAGT TGTCGCACCG CTACATTACG GAGCGGTTCC TGCCCGACAA GGCCATCGAC CTGATGGATG AGGCTGCGGC TCGTCTGCGT ATGGAAGTGG ATTCGCTGCC GGAGGAGCTG GACGAGATCT CGCGCAGGAT CAAGCAACTT GAGATCGAAC GCGAAGCCAT CAAGCGAGAG AATGACGAAG AGAAGGTACA GTTCCTCGAC AGGGAAATAG CCGAACTCAA GGAGAAAGAG GCCTCGGAGA AAGCCCAATG GCAGAACGAA AAAGATCGGA TCAATCAGAT TCAGCAGCTC AAGATAGATA TAGAGGAGCT GAAGTTTCAG GCCGATCGTG CCGAACGGGA GGGCGATTAC GGACGAGTGG CCGAGATACG CTACGGACTC ATCAAGCAGA AAGAGACGGA GATCGACACG ATACAGCAGC AGCTGCACGA ATTGCAGCGT GGCGGCTCCA TGATCAAGGA GGAAGTGGAG GCCGACGACA TAGCCGACAT CGTGTCGCGC TGGACGGGTA TCCCCGTCAG CCGCATGCTC CAGAGCGAGC GCGACAAGCT GCTTCATCTG GAGGACGAGC TGCACAAGCG CGTGATCGGT CAGGACGAAG CCATCCGTGC CGTGGCCGAT GCCGTCCGTC GCAGCCGGGC AGGCCTTCAG GATCCCAAGC GTCCGATCGG TTCGTTCATC TTCCTCGGTA CTACGGGGGT GGGCAAGACG GAGTTGGCAC GTGCCTTGGC CGAATTGCTC TTCGATGATG AGAGCATGCT TACGCGAATA GACATGAGCG AGTATCAGGA GAAGTTCAGT GCCACGCGTC TGATCGGTGC GCCTCCGGGG TATGTGGGCT ATGACGAGGG TGGCCAATTG ACGGAAGCCA TTCGCCGCAA GCCTTATTCC GTGGTGCTTT TCGATGAAAT AGAAAAAGCT CACCCGGATG TGTTCAACGT ATTGCTGCAA GTCCTCGACG ATGGCCGCCT GACCGACAAC AAGGGGCATG TGGTAAACTT CAAGAATACG CTCATCATCA TGACGTCGAA CCTCGGTTCG GACATCATTC GCGAGCGGAT GCAGAACCTC ACGGCGGAGA ATCGCCGGTC CCTCACGGCC CGGACGGCCG ATGAGGTGAT GCAGCTACTC AAGCATACGA TCCGCCCCGA GTTTCTGAAC CGTATCGACG AGACCATCGT CTTCACGCCA CTGACCGAGA AGGAGATCTA CGAGATCGTC CGCTTGCAGC TCGATGGTAT CGTGCGCCAA CTGGCCGATA ACGACGTGGT GCTCCACTAT ACGGAGGCTG TCGTGACCTT TGCCGCTCGC GAGGGATATG ATCCGCAGTT CGGAGCGCGT CCTGTGAAGC GAGTCCTGCA GCGATTCGTC CTCAACGAGC TGAGCAAGGC ACTCTTGGCC GATACGGTGG ACAGTACACG TCCCGTCCTC ATCGATTGCA TAGACGGATC AATCGTCTTC CGCAACGAAT AG
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Protein sequence | MNINNYTIKS QEALQQAVEL TRRHGQQAIE PQHLLKAVMD QGESLTDFLF AKMGLNKGSI ATAVDKLIEK LPHVSGGEPY LSHETNQVLQ AAEDAAHRMK DKYVSLEHIV LAILTTRCEA STLLKDAGAT EQLLQSAIEE LRKGRNVTSQ SAEEQYNALE KYAVNLCQRA RDGKLDPVIG RDDEIRRVLQ ILSRRTKNNP ILIGEPGVGK TAIAEGLAYR IVRGDVPENL RNKQIFSLDM GALIAGAKYK GEFEERLKAV VNEVTGAEGE IILFIDEIHT LVGAGKSEGA MDAANILKPA LARGELRAIG ATTLDEYRKY FEKDKALERR FQMVMVDEPD ELSSISILRG LKEKYENHHK VRIKDDAIIA AVKLSHRYIT ERFLPDKAID LMDEAAARLR MEVDSLPEEL DEISRRIKQL EIEREAIKRE NDEEKVQFLD REIAELKEKE ASEKAQWQNE KDRINQIQQL KIDIEELKFQ ADRAEREGDY GRVAEIRYGL IKQKETEIDT IQQQLHELQR GGSMIKEEVE ADDIADIVSR WTGIPVSRML QSERDKLLHL EDELHKRVIG QDEAIRAVAD AVRRSRAGLQ DPKRPIGSFI FLGTTGVGKT ELARALAELL FDDESMLTRI DMSEYQEKFS ATRLIGAPPG YVGYDEGGQL TEAIRRKPYS VVLFDEIEKA HPDVFNVLLQ VLDDGRLTDN KGHVVNFKNT LIIMTSNLGS DIIRERMQNL TAENRRSLTA RTADEVMQLL KHTIRPEFLN RIDETIVFTP LTEKEIYEIV RLQLDGIVRQ LADNDVVLHY TEAVVTFAAR EGYDPQFGAR PVKRVLQRFV LNELSKALLA DTVDSTRPVL IDCIDGSIVF RNE
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