Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1060 |
Symbol | |
ID | 2553114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1126798 |
End bp | 1128507 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637149762 |
Product | carboxyl-terminal protease |
Protein accession | NP_905276 |
Protein GI | 34540797 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0865615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CCAATCTGTT TTTATCTCTG CTGGTGATCT TTATCACCGG TAGTTTTATG ACTGCCTGTG CACAGAAGTC CAAGACGAAC AAACTCACCG AAGAAGATCG GAGCCGCAAT GAGTATGTAC AGTCGATGGA TGTGCTTAGC AATATTATCG GTAACGTCAG GCTGTATTTC GTCGATACCA TAAGTATCAA ACATATGACT CGGCGTGGTA TAGATGCGAT GTTGGGCGGG CTTGACCCCT ATACCGAATA CATTCCTTAC GAGGAAATGG ATGAACTGAA ATTGATGACT ACGGGAGAGT ATGCCGGAGT CGGAGCTATC ATATCGCAGC GCCCGGATAG TGCTGTGATT ATCCAGAGAC CTATGGAAGG TATGCCCGCA GACGAAGCAG GATTGATAGC AGGCGACCGC ATCCTGACTA TCGATGGGAA AGACTTCCGC AAATCCACCA CACCGAAAGT AAGCCAAGCA CTGAAAGGGA TAGCCGGTAC TGTTGCAAAG GTGACAGTAA TGCGCTATGG CGAAACCAAA CCTCGTACTT TTTCCGTGAA ACGTCAAAAA GTGATTATGA ATTCCGTCAC TTACAGCGGA ATGCTCGATG GCTCGATAGG ATATATCCGC TTGAACAACT TTACGGACAA AAGTGCAGAA GAGGTGCGCA CGGCCTTGTT GGATCTTCGT GACAAACAAG GAGCGAAAGG TCTCATTTTG GATTTAAGAG GCAATGGTGG CGGACTGATG CAGGCTGCTA TCGAGATAGT CAATCTGTTC GTCCCTAAGG GCAAAGAGGT GGTAACGACC AAAGGTCGCA TTGCAGAGTC GGCGTCCGTA TTTCGCACAT TGACTGAACC GATCGACACG AAACTCCCGA TAGTAGTCCT GATCGATGGA CAATCGGCAT CTTCCTCGGA GATTGTAGCC GGAGCACTGC AGGATATGGA CAGGGCTGTA CTGATGGGAC AAAAGAGCTA TGGCAAAGGG CTTGTACAAA CGACTCGTCA GCTACCATAC AACGGCGTGA TCAAATTGAC TACGGCCAAG TACTACATCC CAAGCGGACG TTGTATTCAG CGTTTGGACT ACAGCCGCAC CAATCGGACA GGTATGGCAA CGGCCATTCC TGACAGTCTG CACAAAATCT TTTACACTGC TGCCGGAAGA CGTGTAGAAG ATGCAGGAGG AATCCTGCCT GACATCGAGG TCAAACAAGA TACAGCTGCG ACATTACTTT ATTATATGGC CATCAATAAT GACGTTTTCG ATTTCGTCAC AGGTTATGTG CTCAAGCATA AAACGATTGC CAAGCCGGAG GATTTTTCCA TAACGAACGA GGACTATGCA GCTTTCTGCA AGATGATGGA AGAAAAGAAA TTTGACTATG ATCGCCAGAG TGGCAAGATG CTTGACAAAC TGGAGGAACT GGCTAAGATA GAAGGCTACC TGCCGGAAGC CAACTCGGAG CTTAAAGCAC TACGCGAAAA GCTAAAACCC AACCTGTCGC GTGATCTGCT ACGATTCAAA AAGGAGATAA CAAACTATCT CAACAATGAG ATTGTCACTC GCTATTATTA TGAGCGAGGC AGTATCCGCC AGAGTTTGCC GGAAGATAAG GTAGTCAAAG AAGCTATTAA GCTGCTGAAG GACCATCCGG AACAAATTCG ACAGATCCTT GCAGCTCCGA AAGCAGAGAA TAAAGGGTAA
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Protein sequence | MKKTNLFLSL LVIFITGSFM TACAQKSKTN KLTEEDRSRN EYVQSMDVLS NIIGNVRLYF VDTISIKHMT RRGIDAMLGG LDPYTEYIPY EEMDELKLMT TGEYAGVGAI ISQRPDSAVI IQRPMEGMPA DEAGLIAGDR ILTIDGKDFR KSTTPKVSQA LKGIAGTVAK VTVMRYGETK PRTFSVKRQK VIMNSVTYSG MLDGSIGYIR LNNFTDKSAE EVRTALLDLR DKQGAKGLIL DLRGNGGGLM QAAIEIVNLF VPKGKEVVTT KGRIAESASV FRTLTEPIDT KLPIVVLIDG QSASSSEIVA GALQDMDRAV LMGQKSYGKG LVQTTRQLPY NGVIKLTTAK YYIPSGRCIQ RLDYSRTNRT GMATAIPDSL HKIFYTAAGR RVEDAGGILP DIEVKQDTAA TLLYYMAINN DVFDFVTGYV LKHKTIAKPE DFSITNEDYA AFCKMMEEKK FDYDRQSGKM LDKLEELAKI EGYLPEANSE LKALREKLKP NLSRDLLRFK KEITNYLNNE IVTRYYYERG SIRQSLPEDK VVKEAIKLLK DHPEQIRQIL AAPKAENKG
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