Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0935 |
Symbol | ispE |
ID | 2552951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 994387 |
End bp | 995211 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637149653 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | NP_905170 |
Protein GI | 34540691 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.119052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTTT TTCCCAATGC AAAAATCAAC CTCGGCTTGC AGGTTGTAGC CAAGCGAGCG GACGGCTACC ACAACATCGA GACAGTCTTC TATCCGATCC CGCTGACCGA TGCTTTGGAG ATCGAAGTAC GAGAGGATAC TTGCGACCGT CTTTCCGTCC ATGGCGTTCC CATTGATGCT GCAACGGAGG ATAATTTGGT TATGAAAGCG GTCATGGCTC TTCGCCGAAA ATTTGATTTT CCCCCACTGA CTATCGAGCT TATCAAGCAC ATTCCATCAG GAGCAGGTTT GGGAGGAGGT TCTTCGAATG CGTCTTTCAT GCTGAAGTTG GTGAGGGACT ATTTCTCTCT ACCGATCGAT GACGAAGAAT TGGCGGCAAT AGCACTGACG ATCGGTGCCG ATTGTCCTTT TTTCGTAGGA AATCGGCCGG TATTAGCCAC CGACCTTGGC CAAGTCTTTA CTCCGCTACC CAATTTTTCT CTGTCCGGTC TCCATATCGC TATAGTAAAA CCACCCATCC ATATCAACAC AGCAGCTGCA TACAAAGGTC TCAAGCATGT GGGCAAACGA GAGACAATGC CGGATGAGAT TGTTTACATG CCCGTAGAAG AATGGAGAGG GAAATTGGTG AACGATTTCG AAGAAAGCCT TTTCCCTGAA CATCCTCGAC TTGCCGAACT AAAAGAAATG CTCTATCGGT CGGGGGCTTT GTACGCTGCA ATGTCCGGTT CCGGATCTGC ACTATTCGGT CTTTTCCGGG AAAAGCCTCA GCTCGATAAG GCTGCTATCA CCGACTGCTT CCGATGGCAA AGCATCATCC CCTGA
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Protein sequence | MIVFPNAKIN LGLQVVAKRA DGYHNIETVF YPIPLTDALE IEVREDTCDR LSVHGVPIDA ATEDNLVMKA VMALRRKFDF PPLTIELIKH IPSGAGLGGG SSNASFMLKL VRDYFSLPID DEELAAIALT IGADCPFFVG NRPVLATDLG QVFTPLPNFS LSGLHIAIVK PPIHINTAAA YKGLKHVGKR ETMPDEIVYM PVEEWRGKLV NDFEESLFPE HPRLAELKEM LYRSGALYAA MSGSGSALFG LFREKPQLDK AAITDCFRWQ SIIP
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