Gene PG0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0885 
Symbol 
ID2552917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand+ 
Start bp947885 
End bp948985 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content51% 
IMG OID637149613 
Productphospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase 
Protein accessionNP_905132 
Protein GI34540653 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase
[COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACT GTGATTTTAC GCCGTTGCCT CTCCCTTCGG AGCCTAATAC GACAGTCATT 
GCCGGTCCTT GCAGTGCAGA AAGTGAGGAG CAGATAATGA CTACTGCTCG TGCCCTCAGG 
GATGAAGCAG GCATTCGTAT TTTTCGTGCC GGTCTGTGGA AACCTCGTAC CTTGCCGGGG 
TGCTTCGAAG GAGTAGGAGA AACAGGGCTA CCTTGGTTGG TGCGTGTACA GGATGAATTG 
GATATGCTTG CTACCACGGA AGTGGCTACT CGCGAACACG TAGAGCAAGC CATGCAAGCC 
GGTATCAGAA TACTCTGGTT AGGTGCACGA ACCACATCCA ATCCCTTTGC TGTACAAGAA 
ATTGCCGATA CGATAGGCAA GGACGAATCG GTGATTGTCC TCGTCAAGAA TCCGATCAGT 
CCCGATTTGG ATCTGTGGAC AGGAGCCCTA GAACGGCTTC GGCAGTCCGG AGTTCGACAG 
ATCGGAGCCA TCCATAGAGG ATTCAGTACC TATGCGACCA AGACGTTTCG CAATCCTCCA 
CATTGGCAGA TTCCCTTCGA TTTGAAAAGA CGTTTTCCTT CGTTAACCAT CCTTTGTGAT 
CCGAGTCATA TTACGGGACA GAGAGATCGG ATCGAATCCG TCAGCCAGCA AGCCATGGAA 
ATGAATTTCG ACGGGCTAAT TATCGAGTCG CATTGCTGCC CGGATAAGGC TCTAAGCGAT 
GCAAGCCAGC AGATAACACC TACTGTACTT GCCCAAATCC TCCGGCGACT GCGTATCCCA 
CGGCGCCAAT CCGAAAAGCA AGACGAAGAG CTGATCTCTT GGCGCATGCA GATTGATCAG 
ATAGATGAGA GTATAGTGGA ATTGCTAGCT CGGCGGATGC AAGTGGCATA CGAGATAGGT 
TTGTTCAAAA AAGAGCACAA TCTGGCTGTG GTTCAGAATC TCCGCTACGA ACAACTACAG 
CGCAACCGTG CCCGTACTGC AGCCCTCTTA GGTTTGGACG AAACATTTAT ATCGGAGCTG 
TTCAGCCGTA TTCATGAGGA ATCTGTCCGT CTGCAGACCC TTGCCCCCCA AAAGCCACAC 
ACCGACGACT GTATATCATG A
 
Protein sequence
MKYCDFTPLP LPSEPNTTVI AGPCSAESEE QIMTTARALR DEAGIRIFRA GLWKPRTLPG 
CFEGVGETGL PWLVRVQDEL DMLATTEVAT REHVEQAMQA GIRILWLGAR TTSNPFAVQE 
IADTIGKDES VIVLVKNPIS PDLDLWTGAL ERLRQSGVRQ IGAIHRGFST YATKTFRNPP 
HWQIPFDLKR RFPSLTILCD PSHITGQRDR IESVSQQAME MNFDGLIIES HCCPDKALSD 
ASQQITPTVL AQILRRLRIP RRQSEKQDEE LISWRMQIDQ IDESIVELLA RRMQVAYEIG 
LFKKEHNLAV VQNLRYEQLQ RNRARTAALL GLDETFISEL FSRIHEESVR LQTLAPQKPH 
TDDCIS