Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0588 |
Symbol | panB |
ID | 2552406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 645386 |
End bp | 646207 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637149350 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | NP_904875 |
Protein GI | 34540396 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACGT ACCAACCGGA AGATACTCGT AAGGTAACTA CACATCGCCT CATCGAGATG AAGAGCCGTG GGGAGAAAAT CTCCATGCTC ACAGCTTATG ACTACTCAAT GGCTAAGCTG GTCGATGAGG CCGGTATGGA TGTCATTCTT GTAGGTGATT CGGCTTCGAA CGTTATGGCC GGCAATGTCA CCACCCTGCC CATCACTCTC GATCAGATGA TCTACCACGG CAAGTCTGTG GTCAAGGCCG TCAAGCGTGC TCTTGTGGTC GTAGATCTTC CTTTCGGATC CTATCAGGGC AACTCCAAAG AAGCCTTGTG CTCGGCCATC CGTGTGATGA AGGAGACACA TGCCGACTGT ATCAAACTCG AAGGAGGAGA AGAGGTGCGC GAGTCCATTG TGCGAATCCT CTCGGCCGGT ATTCCCATCA TGGGACACCT CGGACTGATG CCTCAGAGCA TCAATAAGTT TGGCACCTAC AATGTCCGCG CCAAGGAAGA GGCCGAAGCC GAGAAGCTGC TTCAGGATGC TCACCTCTTG GAAGAACTCG GATGCTTCGC TCTCGTCCTC GAAAAAATAC CGGCCGAACT GGCTACACGT GTAGCTTCGG AGCTGAGCAT TCCGGTTATC GGCATCGGTG CCGGAGGTGG TGTGGACGGT CAGGTGCTGG TGATGCACGA CATGCTCGGT ATCACGGAGG GGTTCAGTCC CCGTTTCCTG CGCCGTTATG CCAATCTGGC CAACGAGATA GATCGGGCAC TCAAGCATTA TATCGCTGAT GTGAAGAGTA TGGACTTCCC CAATAAGGAC GAGCAGTACT GA
|
Protein sequence | MSTYQPEDTR KVTTHRLIEM KSRGEKISML TAYDYSMAKL VDEAGMDVIL VGDSASNVMA GNVTTLPITL DQMIYHGKSV VKAVKRALVV VDLPFGSYQG NSKEALCSAI RVMKETHADC IKLEGGEEVR ESIVRILSAG IPIMGHLGLM PQSINKFGTY NVRAKEEAEA EKLLQDAHLL EELGCFALVL EKIPAELATR VASELSIPVI GIGAGGGVDG QVLVMHDMLG ITEGFSPRFL RRYANLANEI DRALKHYIAD VKSMDFPNKD EQY
|
| |