Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0380 |
Symbol | uvrB |
ID | 2551907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 409242 |
End bp | 411278 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637149154 |
Product | excinuclease ABC subunit B |
Protein accession | NP_904687 |
Protein GI | 34540208 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACTACA AACTCACTTC TCGATTCAAG CCCACGGGCG ACCAGCCGGA AGCCATTCGC CAACTCGTAC AGGGCATCAA CGAAGGGATG CCGGCTCAGA CGCTGCTCGG CGTAACGGGT TCGGGCAAAA CTTTTACGGT GGCTAACGTG GTGGCGGCGG TCAATCGTCC GACCCTTGTC CTGAGTCACA ACAAGACCTT GGCAGCACAG CTATACGGAG AGTTCAAAGC CTTCTTCCCC GAGAATGCGG TGGAGTATTT CGTCAGCTAC TACGACTACT ATCAGCCCGA GGCCTACCTC CCCGTCACAG ACACCTATAT CGAAAAGGAC ATGGCCATCA ACGCGGAGAT CGAAAAACTG CGATTGAGGG CCACGGCTTC GCTCCTGTCA GGGCGGAAAG ATGTGCTTGT GGTCAGCTCC GTATCCTGTC TCTACGGTAT GGCCAATCCT GAAGCTTTTT CCGAAAAGGT GATCAGCCTG CACACGGGAC AAAGGGCAGA CAGGGATCAT TTTATCCGCC TGCTGGTAGA GAGCTACTAC ACGAACAATA AAGTAGAGTT CGAGAGCGGC AACTTCCGTG TCAAAGGCGA CAGCGTGGAC ATATTCCCCG CCGTAGAAGG TTATGACGGC GTGGCATACA GGGTGGAGTT TTGGGATGGA GAGGTCGAGC GGCTGAGTAC CTTCGATCCG CGAACGGGAC GGGAATACGG CCTGCTGTCG GAGCTGAAGA TATATCCGGC CAATCTCTTC GTGACGACTA AGGAGCAGGT GGATCGGGCA GTAGGGAAAA TCGATGTGGA TCTGGGCGCA CAGGTCGATT TTCTGAAAGA AATCGGCAAA CCATATGAAG CCAAACGCTT GTATGAGCGG GTCACGTATG ACTTGGAAAT GATCCGTGAG TTGGGTTATT GTTCCGGTAT AGAGAACTAT TCGCGCTACT TCGACGGCCG TGACGCGGGC GAACGTCCTT TCTGTCTGTT GGATTATTTC CCGGAGGATT TCCTGTTGGT CATAGACGAA AGCCATGTAA CGATACCGCA GATACGTGCC ATGTACGGAG GCGATCGTTC GCGCAAGGAG AATCTGGTCG AATACGGATT CCGCCTGCCT GCCGCTCTCG ACAATCGGCC GCTTCGCTTC GACGAGTTCG AAGCTCTCAC CCCCCGGACC CTTTATATCA GTGCCACGCC TGCCGACTAT GAGCTGAACA GAAGCGAAGG CGTGATCGTC GAGCAGCTGA TCCGTCCGAC CGGACTGCTG GATCCCATCA TCGACGTCAA GCCGACGGCA AACCAAGTGG ACGATCTGAT GGAGGAGATA GCACGCTGCA TCGAAAAGAA AGAGCGCGTA CTGGTAACGA CCCTGACCAA ACGTATGGCA GAGGAGCTTA GCGAATACCT GCTACGCCAC GGTATCAGCA CCGGCTACAT ACACAGCGAT GTGGACACGC TGGAGCGTGT GCGTATCATG GAAGACCTGC GCAAGGGGGT CTACGATGCA CTCATCGGGG TGAATCTGCT CCGCGAAGGA TTGGACTTGC CGGAAGTTTC GCTTGTGGCT ATTCTGGATG CGGATAAGGA AGGATTCCTG CGCTCGCATC GTTCGCTCAC GCAGACTGCA GGACGTGCCG CCCGGCACAT TCATGGGCGT GTCATCTTCT ACGCGGACAA GATCACCGAC AGTATGCAGC TCACCATGGA CGAGACTGCA CGCCGACGCG CAAAGCAACT GGCCTACAAC GAAGCGCACG GCATCACCCC CCAACAGATA GTGAAGAACA GTGCTGCCAT TTGGGGAGAA GGCGATGTGT CGGCCTTGCA ATCCGATACA GAATCCGGTG CGTACATAGA AGAGAGCAGC ATGGTGGCTG CCGATCCTTT GGCCGACTAT CTGAGCAAAC CCAAGCTGGA AGCACTCATT GCTTCGACCA AGAAGCAAAT GCTGGCAGCA GCCAAAGAGC TGGACTTTCT GGAAGCGGCA CGACTTCGGG ACGAAGCCGC ACGATTGGAA AAGAAACTGG AGCAACTCAC AGCCTAA
|
Protein sequence | MDYKLTSRFK PTGDQPEAIR QLVQGINEGM PAQTLLGVTG SGKTFTVANV VAAVNRPTLV LSHNKTLAAQ LYGEFKAFFP ENAVEYFVSY YDYYQPEAYL PVTDTYIEKD MAINAEIEKL RLRATASLLS GRKDVLVVSS VSCLYGMANP EAFSEKVISL HTGQRADRDH FIRLLVESYY TNNKVEFESG NFRVKGDSVD IFPAVEGYDG VAYRVEFWDG EVERLSTFDP RTGREYGLLS ELKIYPANLF VTTKEQVDRA VGKIDVDLGA QVDFLKEIGK PYEAKRLYER VTYDLEMIRE LGYCSGIENY SRYFDGRDAG ERPFCLLDYF PEDFLLVIDE SHVTIPQIRA MYGGDRSRKE NLVEYGFRLP AALDNRPLRF DEFEALTPRT LYISATPADY ELNRSEGVIV EQLIRPTGLL DPIIDVKPTA NQVDDLMEEI ARCIEKKERV LVTTLTKRMA EELSEYLLRH GISTGYIHSD VDTLERVRIM EDLRKGVYDA LIGVNLLREG LDLPEVSLVA ILDADKEGFL RSHRSLTQTA GRAARHIHGR VIFYADKITD SMQLTMDETA RRRAKQLAYN EAHGITPQQI VKNSAAIWGE GDVSALQSDT ESGAYIEESS MVAADPLADY LSKPKLEALI ASTKKQMLAA AKELDFLEAA RLRDEAARLE KKLEQLTA
|
| |