Gene PG0332 details

Gene Information

• Locus tag: PG0332
• Symbol: rho
• ID: 2551665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 365759
• End bp: 367735
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637149113
• Product: transcription termination factor Rho
• Protein accession: NP_904646
• Protein GI: 34540167
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGAAGT ACACGATCGT CGATTTGAAC GAAAAGGCTG AAGCTGAACT CGCTGCTATA 
GCCGGCGAGC TGGGTATTGC CAATGCCGGC TCAATGCCCA AACAAGAACT TATTTACAAA 
ATACTCGACG AGCAGGCTAT CAGTGTAGCC GGCGTCCGGA AGGAAAAACA AAAAACGACG 
GAAGACCGGC ACACCGAAAG GCGCAAGCCG GGTCGTCCGC GCAAAAACGC CGAGGAGGAA 
GCTCCCGAAA GCGAAGACGT CGCAGCCGCT CCTGCCGAGC CGAACGACGA GGAAGCTCAG 
GCCAAACGCA AGCGTGGCCG CCCTCGCAAA GCGGCGGAAG AGATAGCGGA AGAGACCCGG 
GAAGATGTGC AGCAGCTCGT GGCTCTGGCT GCTGCAGAGG AGACAAATGC AACGGAGAAG 
GAGAGTGCCG GGCGGAAGCC GGCGGCGAAA ACGTCCACCG CATCCCCTGC CAAAGCCCCT 
GCCAAAGCCC TTCCCCGTCC GGCGGAGACC ACCCCGCGCG TGGCACCGTC TCCCCCTCCC 
ACGACGCCCG TGAGCGAGCC GGCCAAGGAC GATGCCAAGC CCGAGACGCC CGCTCCTCCC 
CCCGCCATCG AGTCCATCAC CACGACTCCT GCTGCCGGAG CCGTCGATGA GGGCGGTGCT 
CGCCGCCTCG TATTCAGGCA CAAGAACAGC TCCTCGGTAT TGGATCAGGT GCTGCCGTAC 
AGCTCTCCCC AGCCCCCGCA GAGGCCCAAA CCGGCCGGTG CTCCGGTCGG CAGCAGCCCG 
ATCAGGCAGC GACAGGCGGC CGGCGTGCCG ACTCCCCGTC GCGAACCTCA GCAACCTCTC 
TACAACTTCG ACGGCATCCT CGAGTGCATG GGTGTACTGG AGATCATGCC CGACGACTAC 
GGATTCCTCC GCTCCTCGGA CTACAACTAT CTGTCCTCTC CGGACGATGT GTACGTGTCC 
CAGCAGCAGA TCAAGCACAA CGGACTCAAG ACGGGCGACG TCGTGGCAGG TACTATCCGT 
CCGCCCAGAG AGGGGGAGAA GTACTTCCCC TTCGTGCAGC TGCGGAGTGT GAACGGTCGC 
AGCCCCGAAG AGATCCGCGA CCGCGTGCCC TTCGATCATC TCACACCCCT CTTCCCCGAA 
GAGAAGTTCA CCCTCGAAGC ACCGGGCATC CGTGCCGTAA ACGATAAAAT ATCCGTCCGC 
GTCGTAGACC TCTTCGCCCC CATAGGCAAA GGACAGCGCG GCCTGATCGT ATCGCAGCCC 
AAGACGGGTA AGACGATGCT CCTCAAGGAC ATTGCCAATG CCATCGCAGC CAATCACCCC 
GAAGTGTACA TGATCGTCCT GCTCATCGAC GAGCGTCCCG AAGAGGTCAC CGACATGGCG 
CGAAGTGTGA ACGCCGAGGT CATCGCTTCC ACCTTCGACG AGCCGGCAGA GCGTCACGTG 
AAGATCGCCG AGATCGTCCT GAACAAAGCC AAAAGAATGG TGGAGTGCGG TCATGACGTA 
GTCATCCTGC TCGACTCCAT CACCCGCCTG GCACGTGCAT ACAATACCGT ACAGCCCGCA 
TCGGGCAAGG TGCTCTCCGG TGGTGTCGAT GCCAATGCCC TGCAGAAGCC GAAACGCTTC 
TTCGGTGCCG CTCGCAACAT CGAAAACGGC GGTAGTCTCA CCATTCTGGC CACGGCGCTG 
ACCGACACGG GTTCTAAGAT GGACGAGGTG ATATTCGAAG AGTTCAAGGG TACGGGCAAT 
ATGGAGCTGC AGCTCGATCG CCGCCTGTCC AACAAACGCA TATTCCCCGC CGTGGACATC 
ATGTCCAGCA GTACCCGTCG CGACGACTTG CTGCAGGACG AGACCACGCT GAACCGTATG 
TGGATCCTGC GCAAGTACCT CTCCGACATG AATCCTGTCG AAGCCATGGA GTTTGTGCGT 
AAGCAGCTGG AGAATACGCA TACCAATATG GAGTTCCTCG CCTCGATGAA CAACTGA 

 

Protein sequence

MQKYTIVDLN EKAEAELAAI AGELGIANAG SMPKQELIYK ILDEQAISVA GVRKEKQKTT 
EDRHTERRKP GRPRKNAEEE APESEDVAAA PAEPNDEEAQ AKRKRGRPRK AAEEIAEETR 
EDVQQLVALA AAEETNATEK ESAGRKPAAK TSTASPAKAP AKALPRPAET TPRVAPSPPP 
TTPVSEPAKD DAKPETPAPP PAIESITTTP AAGAVDEGGA RRLVFRHKNS SSVLDQVLPY 
SSPQPPQRPK PAGAPVGSSP IRQRQAAGVP TPRREPQQPL YNFDGILECM GVLEIMPDDY 
GFLRSSDYNY LSSPDDVYVS QQQIKHNGLK TGDVVAGTIR PPREGEKYFP FVQLRSVNGR 
SPEEIRDRVP FDHLTPLFPE EKFTLEAPGI RAVNDKISVR VVDLFAPIGK GQRGLIVSQP 
KTGKTMLLKD IANAIAANHP EVYMIVLLID ERPEEVTDMA RSVNAEVIAS TFDEPAERHV 
KIAEIVLNKA KRMVECGHDV VILLDSITRL ARAYNTVQPA SGKVLSGGVD ANALQKPKRF 
FGAARNIENG GSLTILATAL TDTGSKMDEV IFEEFKGTGN MELQLDRRLS NKRIFPAVDI 
MSSSTRRDDL LQDETTLNRM WILRKYLSDM NPVEAMEFVR KQLENTHTNM EFLASMNN