| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0162 |
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| Symbol | |
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| ID | 2552235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 184595 |
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| End bp | 185176 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637148970 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | NP_904503 |
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| Protein GI | 34540024 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGTT TCCACAAGCT GACTGATGAT GAATTGGTCA GCCTTTATAC AGAAGGATGC
GATGAGGCTT TCGATGTCAT ACTGTCCCGG TATGATGCTG TAGTTCATAC TTACATCCGT
TTTTCCGTGA GCGATGCCGA TTTGGCGGAG GATATTTTTC AGGACACTTT TATCAAGGTG
ATCCATACGC TTCGTCGCGG ACAATACATC CCCACCGGCA AGTTCAAAGC TTGGCTGCTA
CGCCTTGCGC ACAACCTCGT GATGGATCAC TACCGCCGGG TCAGAGGGGA AGGAGCCAGA
TTGCAGTCTT TCGATGATGA CGACGCCGCT CCTGTCGAAA AGGTGGCGGA CAGCAATCTG
ACGGCGGAAG AACAACTGAT CGAACTGGCT ACTATCGAAG AGCTGGAACA GTACCTGAGC
GTCCTGCCCG AAGTGCAGCA GGAAGTAGTG AGAATGCGCT ACTGGGAGGA CATGAGCTTC
CGAGAGATTG CAGATGCTAC CGGAGTAAGC ATCAATACGG CACTCGGCCG AATGCGATAT
GCGCTGATCA ATCTGCGCAA AATGATGGGC ATGTCGGCTT AG
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| Protein sequence | MSSFHKLTDD ELVSLYTEGC DEAFDVILSR YDAVVHTYIR FSVSDADLAE DIFQDTFIKV
IHTLRRGQYI PTGKFKAWLL RLAHNLVMDH YRRVRGEGAR LQSFDDDDAA PVEKVADSNL
TAEEQLIELA TIEELEQYLS VLPEVQQEVV RMRYWEDMSF REIADATGVS INTALGRMRY
ALINLRKMMG MSA
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