Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0092 |
Symbol | |
ID | 2552600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 107549 |
End bp | 108688 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637148902 |
Product | transporter, putative |
Protein accession | NP_904440 |
Protein GI | 34539961 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0602598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGAG AGGTGCGACA ACTGACGAGT CGCGTCCTCT TCCTCTTCTG CATGGTGATA GCTCCTGTCT TTTGCTGTCT CTTCTTCCCC TCCATCATGG ATATGGGGTT GCCGCAGAAC CTGCCTGCGG GTATTGTGGA TCTCGATCGT ACACAGACGT CGCGCACCAT AGCACGCCAC CTCAATTCGA TGGAGCAAAC CCAAATCGTC AAACAGTTCG AAAGCGTGCG TGAGGCTCGG CTGGCAGTAC AGCGAGGCGA GATATACGGT TACTACTATA TACCCGAGGG AATGACACGG GATGCCTACG CACAGAAGCA GCCCAAGCTC TCCTTCTATA CCAACTATGC CTATATGGTG GGTGGCTCGC TCCTCTTCAG GGACAACAAG ATGATCAGCG AACTGGTAGC CGGTGCAGCC GCTCGTTCGC AACTTTATGC CCGAGGAGCC ACCGAAAGCC AGGCCATGGA CTGGCTACAG CCGATCGTTA TCGACACGCA CCCCATAGGC AATCCGTGGC TCAACTACTC CATCTACCTG AGCAATATCA TGATACCCGG CGTACTGGGT CTGCTCATCT TCATGGTCAC AGTGTGTAGC ATAGCCATGG AGATCAAGAG ATCGACAGCT CGAGAATGGA TGGAGACGGC CGGCGGCAGT ATGTCCATCG CCCTTTTGGG CAAGCTGCTA CCCCAAACCG TGGCATTCAT GCTCATCGGC ACCTTTATAG ACGTATATCT GTATGGCTTC CTCTCCTACC CGATCAATGG CGGATTCTTG CCGATGCTGA TAGTCATGTA TCTCTTCATC CTCGCTTGTC AGGGTTTTGG CGTACTGATG TTCGTCACCC TCCCGACGAT GAGATTGGGA CTTAGCTTTG CTTCCCTATG GGGCATTATC TCTTTCTCCA TATGCGGAGC CTCGTTTCCC GCTCTCGGTA TGCCGACTGT CATGCAGTCC GCCAGCGCGC TATTTCCGTT GAGGCACTAC TATCTCTCTT ATGTGACAAG TGCCCTTGAT GGATTTTCCC TGAAATATGC TTGGACCAAT ATCCTCGCTT TCGTCATCTT CGCATTGCTG CCGCTACTGC TCCTTCGCCG GCTCAAGCAC ATACTCCTAA CCTACAAATA CGTCTCTTGA
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Protein sequence | MRREVRQLTS RVLFLFCMVI APVFCCLFFP SIMDMGLPQN LPAGIVDLDR TQTSRTIARH LNSMEQTQIV KQFESVREAR LAVQRGEIYG YYYIPEGMTR DAYAQKQPKL SFYTNYAYMV GGSLLFRDNK MISELVAGAA ARSQLYARGA TESQAMDWLQ PIVIDTHPIG NPWLNYSIYL SNIMIPGVLG LLIFMVTVCS IAMEIKRSTA REWMETAGGS MSIALLGKLL PQTVAFMLIG TFIDVYLYGF LSYPINGGFL PMLIVMYLFI LACQGFGVLM FVTLPTMRLG LSFASLWGII SFSICGASFP ALGMPTVMQS ASALFPLRHY YLSYVTSALD GFSLKYAWTN ILAFVIFALL PLLLLRRLKH ILLTYKYVS
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