Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0087 |
Symbol | |
ID | 2551494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 102595 |
End bp | 103215 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637148898 |
Product | SIS domain-containing protein |
Protein accession | NP_904436 |
Protein GI | 34539957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.129627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAG AAATACACAA TCGAACCATC TCCGAAATAC TGGCACATGA AGCTGAAGCC ATCCGTACCA TCCCTGCAGA CAACGACTAT AAGGCGGCTA TCGACCTCAT TGTTCGTCAA GTGCATGGCT CTAACGGTCG GCTGATAACT TCGGGTATGG GCAAGGCCGG ACAGATTGCT GCCAACATAG CCACGACTTT CAGTTCCACC GGTACTCCCG CATACTTCCT TCACCCGAGC GAAGCCCAGC ATGGCGATTT GGGTTTGGTG CGTAGCGGTG ATATTATGCT TCTGATCAGC AATTCGGGGC GAACGCGCGA AGTACTGGAG TTGGTAGAGC TGACCAAACG CTTGGTTCCC GATACGAAAT TCATCCTCAT TACAGGCAAC CCCGAGAGCC AGCTTGCGGC GGAGGTGGAT GTCTGCCTGG CCACCGGCAA TCCGGCCGAA GTATGTCCTT TGGGAATGAC TCCGACTACC AGTACGACGG TGATGACAGT GATCGGCGAT GTTCTGGTCG TAGGTACGAT GCAGGAGATC GGCTTCGGCT TCGAGGATTA TGCACGTCGC CATCACGGCG GTTATCTTGG CGACAGAAGT CGCGAAATAT GTGGGCGATA G
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Protein sequence | MKAEIHNRTI SEILAHEAEA IRTIPADNDY KAAIDLIVRQ VHGSNGRLIT SGMGKAGQIA ANIATTFSST GTPAYFLHPS EAQHGDLGLV RSGDIMLLIS NSGRTREVLE LVELTKRLVP DTKFILITGN PESQLAAEVD VCLATGNPAE VCPLGMTPTT STTVMTVIGD VLVVGTMQEI GFGFEDYARR HHGGYLGDRS REICGR
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