Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0072 |
Symbol | lpxD |
ID | 2552395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 86188 |
End bp | 87237 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637148884 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | NP_904422 |
Protein GI | 34539943 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTTA CAGCCCAACA GATAGCTGAC TACCTCCACG GTTCTGTGGA GGGCAATCCC AAGGTGCGAC TGCACGACTT TGCCAAGATA GAGGAAGGTC GTAGTGGCTG TCTCTCGTTT TTAGCCAATG CTAAGTACGA ACACTATTTG TACCAAACAC AATCCGATGC AGTACTCGTC AATCAGGACT TCGAACCGCG CGAATCGGTG AAGACGACCC TGATACGAGT TCCCAATGCC TATACAGCAT TGGCGCAACT AATGCAGTTG GTGGACAGCA TGAAGCCCCA AAGGAAGGGA GTCGATTCCA CGGCTTTCGT TCATCCATCG GTGATACTGC CGGATGATTG CTATGTAGGA GCTTTTGCCT ACGTGTCGGA AGGGGCATCG CTGGGTACAG GCTGTAGCTT GTATCCGCAT GTTTATGTAG GTAGCGGTGT GTCTGTTGGA GAGGGGACGA TCCTCTACCC CCATGTGACG GTCTATGATG GCTGTTCCAT CGGTTCGCGT TGCGTGATTC ATTCGGGAGC CGTTATCGGA GCGGATGGAT TCGGTTTTGC TCCGAATGCC GAAGGCTACA GCAAGATTCC GCAACTGGGG AACGTTATCA TTGAAGATGA TGTCGAAATC GGTGCCAACA CTTGTATCGA CAGGGCTGTT ATGGATTCAA CGATCATACA TCGCGGAGTA AAGCTAGACA ACCTTGTACA GATTGCTCAC AACTGTTCTG TCGGAAGTCA CACGGTTTTT GCTGCCCAAG TCGGCATGGC CGGTTCGTCC CATGTGGGCG AATGGTGCCA GTTCGGAGGG CAGGTGGGTT TGTCCGGGCA CATCAAAGTG GGAGACAGGG TCAGTTTAGG AGGACAGACC GGCTTGTTGA GCAACGTCAA ATCCGGTTCC ACGCTTCTCG GTTCGCCCGG GATGCCGCTA CGGGATATGC TGCGAGCATC GGTCATCTTT CCCAAACTCC CGGATATGAG CCTTCGCATC GAACAGCTGG AAAAAGAAAT ATCAGAACTA AAAGAAATAT GCAAAAACAA CAAACACTGA
|
Protein sequence | MEFTAQQIAD YLHGSVEGNP KVRLHDFAKI EEGRSGCLSF LANAKYEHYL YQTQSDAVLV NQDFEPRESV KTTLIRVPNA YTALAQLMQL VDSMKPQRKG VDSTAFVHPS VILPDDCYVG AFAYVSEGAS LGTGCSLYPH VYVGSGVSVG EGTILYPHVT VYDGCSIGSR CVIHSGAVIG ADGFGFAPNA EGYSKIPQLG NVIIEDDVEI GANTCIDRAV MDSTIIHRGV KLDNLVQIAH NCSVGSHTVF AAQVGMAGSS HVGEWCQFGG QVGLSGHIKV GDRVSLGGQT GLLSNVKSGS TLLGSPGMPL RDMLRASVIF PKLPDMSLRI EQLEKEISEL KEICKNNKH
|
| |