| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0016 |
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| Symbol | |
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| ID | 2552746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 17087 |
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| End bp | 18436 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637148834 |
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| Product | sigma-54 dependent DNA-binding response regulator |
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| Protein accession | NP_904373 |
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| Protein GI | 34539894 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.420092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA GCGGCAATAT CATCGTGGTC GATGATAACA AACATGTACT GACGGCTTTG
AAATTGCTCC TGACGGGGAG TTTCGAGACC GTGACGCTCC TACCTTCCCC CAAGACACTG
CTTTCCACGA TCGTAGAGGT GCATCCGGAT GTACTCCTGC TGGATATGAA TTTTTCTACC
GGCATCAATA CGGGTAATGA AGGATTATAT TGGCTGGATC AGGTCCGTAG CCGTTTCCCT
GACCTCCCTG TGGTACTCTT TACCGCTTAT GCGGACATTC GTCTGGCAGT GGAAGCCTTG
AAGCGTGGAG CAAGCGATTT CGTAGTCAAG CCGTGGAACA ACACCGAGCT GTTGGAGTCG
CTTCGCATGG CGATGAATAA GGCCGCAAGC ACTCAAGTGA CGGCTACACC TAAAGAAGGC
GATTCGGTAT TTCTCAGCAA AAGCAAGGCC ATGTGTGAGG TGTTGGAGCT GGCTGGTCGT
ATCGGCGATA CTGCAGCCCA TGTCCTCATT ACGGGTGAGA ATGGTACCGG CAAGGGCGTT
TTAGCCGAGT ATATCCATGC CCGTTCTCCT CGTAGCCGGC AGCCGATGCT GACTGTGGAT
ATGGGAGCTT TGAGCGAGAC GCTGTTCGAG AGCGAACTGT TCGGCCATGT GAAAGGAGCC
TTTACCGATG CCAAAAGCGA TCGCGCCGGC AAGTTCGAGA CGGCGTCCGG CGGCACGATC
TTCATGGACG AGATTGGCAA TCTGAGCCTT GCCTTGCAAG CCAAGTTGTT GGCTGTACTA
CAGCAAAAAG TGGTGACCCG TGTGGGCAGC AATACACCGA TCCCTGTGGA TGTTCGTGTC
ATCTCTGCCA CGAATAGCGA TTTGCCCCTC TCCGTGGCAG AAGGCCGGTT TCGAGAAGAT
TTGCTTTATC GTCTCAATAC GATTCATATC GAGATGCCGC CGCTACGTCG TCGCAGGGAA
GATATAGTGC CGATGGCCGT ATTCTTCCTG CATCGTTATG CACGACAGTA TGGAAAAGAG
GTGCCGGAAT TGACTCCCGA AGCAGAGGCC CTACTCTCCG ATTATCCGTG GCCGGGCAAT
GTGCGTGAGC TTCAGCATTG CATAGAGAAG GCTGTGATCC TTAGCCGTAG CAGTAGCCTT
TCTGCTGCGG ATCTGTCGTT GCCGAAGTCG GTCGATGCAC ATCCGACTGC TACCGGTGTA
GCAAGCACTC CTCAGACGTT GGATGAAATG GAAAAGACCG CTATCGAGCA AGCCTTGGCA
CGAAACGGCA GCAACCTTTC GAATGTGGCA AGGGAATTAG GCATCAGCCG CCAGACTCTG
TATAATAAGA TGAAACGCTA CGGGCTGTAG
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| Protein sequence | MKKSGNIIVV DDNKHVLTAL KLLLTGSFET VTLLPSPKTL LSTIVEVHPD VLLLDMNFST
GINTGNEGLY WLDQVRSRFP DLPVVLFTAY ADIRLAVEAL KRGASDFVVK PWNNTELLES
LRMAMNKAAS TQVTATPKEG DSVFLSKSKA MCEVLELAGR IGDTAAHVLI TGENGTGKGV
LAEYIHARSP RSRQPMLTVD MGALSETLFE SELFGHVKGA FTDAKSDRAG KFETASGGTI
FMDEIGNLSL ALQAKLLAVL QQKVVTRVGS NTPIPVDVRV ISATNSDLPL SVAEGRFRED
LLYRLNTIHI EMPPLRRRRE DIVPMAVFFL HRYARQYGKE VPELTPEAEA LLSDYPWPGN
VRELQHCIEK AVILSRSSSL SAADLSLPKS VDAHPTATGV ASTPQTLDEM EKTAIEQALA
RNGSNLSNVA RELGISRQTL YNKMKRYGL
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