| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0006 |
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| Symbol | |
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| ID | 2552738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 5094 |
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| End bp | 6422 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637148824 |
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| Product | MATE efflux family protein |
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| Protein accession | NP_904365 |
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| Protein GI | 34539886 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0243937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCACT ATGCTCTGCC GGCGGTGGTG GGTACAGCAG TCAATTCGCT ATACAACATC
GTAGACCGCA TCTTCATCGG GAACGGGGTG AGCGAATATG CCTTGTCGGG CTTGGCTATC
ACCTTCCCAA TCCTGATCTT CCTGATGGCC TTCGGTATGC TGGTAGGGGC CGGTGCGTCC
GTGAGGGTCT CTATCCTGCT GGGGAGAAAA GACATAAAGG AGGCCGAACA CACACTGGCC
AATGCCATCT TCCTGACCTT CTTCACACAA GCCCTGACCA TTATCCCCTG CTATATTTTC
ATGGAGCCGC TGCTTCGGCT GTTCGGAGCC AGCGAACGTA CGTTGCCGTA TGCCATGGAA
TACCTCCAAT ACGTGGTTCC TGCCAATATT TTCTCAGCTC TGAGCTTCGG CTACAATGCT
ATCATGAGAG CTTCGGGCTA TCCGCGCAAA GCCATGATTA CGATGATCAT CGGGGCTATG
ACGAACGTGG TGCTGGACTA CATCTTCATC TATCCGTTGG GGATGGGGAT AAGCGGAGCC
GCCATAGCGA CTGTCGTCTC CATGATAGTA TGTTCGGTCT ACGTCCTTTC GCACTTTTTC
CGTAAGGACA GTATCGTACG TTTCCACCGC TCGGCTTTCC GCCTGTCCCT GCCGGTGATC
GGCGGCATAA CGGCTATAGG GGTAGCACCC TTCGCCATGC ACCTTACGGG CAGTCTGGTC
AATATCATCA TGAATCGTTC TTTCGTATCC TACGGCGAGA CAGCAGATGC TACCGACTTG
GCCATCGGAG CATTCGGGAT TATCAATGGC TATGCCATGC TCTTTTTCAT GATTATCATC
GGTGTGGCTC AGGGGATGCA GCCGATCGTA GGTTTCAACT ACGGGGCTAA AAATCCGGGA
CGGGTGAAGT CGGCCTATCG CTACAGTTGT GGCGTCAATC TACTGGTCAG CTTTCTCGGT
TTTGCTCTGG CTATGCTTAT GCCGAGGACA ATCGTGAGTC TATTCACCAA TAGCGAACAG
ATGATAGAGC TATCTGCTTC GGCTCTTCGC ACGGCCTTGA TCGGGCTTTC TCTGGTCGGC
TTTCAAGTTA CCACGACGCA ATTCTTCCAA AGCATCGGCT TCAGCCATAA GGCTATTTTC
CTGAGCCTAA CGCGCCAGAT CATCTTCCTG ATTCCCTGTT TGCTGATTAT CCCCCGATTC
ATGGGGTTGG ACGGCGTGTG GTGGAGTCTG CCGATCAGCG ATCTGGCCTC GGTCGTTTTG
TCTTTTGTGC TAATTACCAT ACAGATGAAG CATTTCAATC AATCGAAAAA AACTACTTTC
GCGGAGTAA
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| Protein sequence | MFHYALPAVV GTAVNSLYNI VDRIFIGNGV SEYALSGLAI TFPILIFLMA FGMLVGAGAS
VRVSILLGRK DIKEAEHTLA NAIFLTFFTQ ALTIIPCYIF MEPLLRLFGA SERTLPYAME
YLQYVVPANI FSALSFGYNA IMRASGYPRK AMITMIIGAM TNVVLDYIFI YPLGMGISGA
AIATVVSMIV CSVYVLSHFF RKDSIVRFHR SAFRLSLPVI GGITAIGVAP FAMHLTGSLV
NIIMNRSFVS YGETADATDL AIGAFGIING YAMLFFMIII GVAQGMQPIV GFNYGAKNPG
RVKSAYRYSC GVNLLVSFLG FALAMLMPRT IVSLFTNSEQ MIELSASALR TALIGLSLVG
FQVTTTQFFQ SIGFSHKAIF LSLTRQIIFL IPCLLIIPRF MGLDGVWWSL PISDLASVVL
SFVLITIQMK HFNQSKKTTF AE
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