Gene PCC8801_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4563 
Symbol 
ID7106067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011727 
Strand+ 
Start bp11271 
End bp12215 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content49% 
IMG OID643477432 
Productintegrase domain protein SAM domain protein 
Protein accessionYP_002374530 
Protein GI218249160 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGGAT CACCAGCCAA AAAAGCCCCC CGTCATCAGT CTCTTACCTC CCCCACCGAT 
CTCCAAAACG TTCGCGTGGA AGAATTTTTA GCGACGAAAG CCTTATCCCC TAATTCTCAA 
AAGGCTTACC GTCGAGAATT GTTGACCTTT CTAGCTATTG TCAATAAACC GTTTGCTCGT 
ATCCAATCTC GTCATATTGT TCAATATAAA GTTCAACTCA CGGAAAAACT CGCCCCTAGT 
TCCGTTAACC GCGCTTTATC CGCCCTCAGC AGTTTTTTTG ATTGGCTCGA AGAGGCCTAT 
GGCAACCCTA ACCCCACCCT CACCATCCGA CAAAATAAAC TCCCGTTACC CCCCGCGAGA 
GATTTAAGCG ATGCTGAACT AGAGGCTTTG TTTGAAGCCT TAGAAAATCG CCCTAATCTG 
ACAAAAGTCA GAGATAAGGC GGTGTTTGCC GCCCTACGAC ATGGACTGAG GGCTGGAGAA 
GTCGCCTCCC TGAATTTAGG GGATTATGAT GGAATTCGCT TACACATTCG GGTGGCCAAA 
GATGATAGTA GTGGCCACGT TCCCCTAGAT GCCCCCGGGC GCGATGCCAT TAATACCTAT 
CTTCAACAAC GTCGAGAAAC TGGAGAATCC TTTAATCCCA CGTCCCCTTT GTTTTTGTCC 
CATTCCCCTG TGCCGAATAC TCCCCCTCGC TTCGGCTATC AAGGCATTTA TTATTTTATT 
AAAGAGTTAG GAGAGATGGC AGGAGTGGCC AATTTAACCC CCCATCGCCT ACGCCATACC 
TTTGCTACCC AATTATTGTT AACGGGAATG GAACCCCTCC ATGCGCGAAC CCTGACTCGC 
CATAAATCCG AGGTCAGTTT TAAACGCTAT GCTAAACGGG CTTTAGAAGC TGCTGCCGAA 
CGCGCTTTTT ATCGGGCGAT CGGGGAAGAA CCGCCAACTC TTTAA
 
Protein sequence
MSGSPAKKAP RHQSLTSPTD LQNVRVEEFL ATKALSPNSQ KAYRRELLTF LAIVNKPFAR 
IQSRHIVQYK VQLTEKLAPS SVNRALSALS SFFDWLEEAY GNPNPTLTIR QNKLPLPPAR 
DLSDAELEAL FEALENRPNL TKVRDKAVFA ALRHGLRAGE VASLNLGDYD GIRLHIRVAK 
DDSSGHVPLD APGRDAINTY LQQRRETGES FNPTSPLFLS HSPVPNTPPR FGYQGIYYFI 
KELGEMAGVA NLTPHRLRHT FATQLLLTGM EPLHARTLTR HKSEVSFKRY AKRALEAAAE 
RAFYRAIGEE PPTL