Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_4560 |
Symbol | |
ID | 7106060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011727 |
Strand | + |
Start bp | 5342 |
End bp | 9799 |
Gene Length | 4458 bp |
Protein Length | 1485 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643477430 |
Product | YD repeat protein |
Protein accession | YP_002374528 |
Protein GI | 218249158 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAA CCCTTGAGGT TTTAGATTTT AATGATGTGG ATGCCCCTAT TATTAACTTC CCTAGATTAG CGAATAATAC GATTACTTCC CCCATTGAAA TTATTGGCAC GGTGACTGAT TATGATGAGG ATAATCATGA TACGTTACAG TATTATACTT TGGAAGTAGC TAAGTTAGGA ACCGATGATT TTCAAGAGGT CTTTAAAGGA ACGAAGTCAG TTAATAATGG GGTCTTAGGA ATTTTTGACC CGTCGTTATT AGAAAATGAT GCTTATACTT TACGATTAAA AGCGGTTGAT AGAGGAGGTA ATCTTGTTTT TGAAGAAAGA ACGATTAACG TTGAAGGAGA CTTAAAATTA GGCAACTTCC AATTATCGTT TACGGATTTA TCGATTCCGG TGGCCGGGAT TCCTATTAGT ATTACCAGAA CCTATGATAC GTTAACGGCA CAAGAAAGGG ATGATTTTGG GTATGGATGG CGATTAGAAT TTAGGGATAC TAATTTAAGA ACCAGTTTAG GAAAAGATGA CTATTATGAG ACGTTTGATA TTATTGGTCA AGGGTTTAAA GAAGGGGATA AAGTCTATCT TACCTTACCA GGAGGGAAAC GAGAAGCCTT TACGTTTAAG CCTGAATTAG ATAGATTAGG GGCATTTTTA CAGGGGGCTG CTGCGGGGTT AGGACTAGGA GAAGACCCGG GGTTATATCA TCCTAAATTT GTTTCTGAGT CCGATTCTAA TAATGTGTTA ACCGTCAAAG ATGTGTTAAT TATTCGGACT GCTAATGGAG ATTTTGCGGG GTTAGCCGGG AATTTATATA ATCCAGTTGA CCCTTATTTT GGGGGACAAT ATACGTTAAC GACAGGGGAG GGTATTGTTT ATGAAATTGA GGCAGAAACG GGAGATTTAT TAACGGTAAC GGATACGAAT AATAATCGAT TAACCTTCTC TGAGAATGGC ATTAAAAGTG AGACAGGAGT CGAAGTTAAA TTTAATCGAG ATGCTAAGGG AAGAATTACC TCAATTGTTG ACCCAATGGG GAATGTAATT AAGTATGACT ATGATGGTCA TGGGGATTTA ATTAAGGTTA TTGATAGGGA AGAGAATGAA ACGAAGTTTG ATTATAGTGA GGAAAGGAAG CATTATTTAG AGAGAATTAT TGACCCGTTA AATCGGGAAG CGGTGAGGAC TGAATATGAT GAAACTGGAC GGTTAAAGAA GGTAATTGAT GTTAATGGAG AAGCGGTTGA ATTAGTTTAT GATGTTGATA ATTCGACGCA GACAACTAAG GGGGAAGAAG GTTATACAAC GACTTATACT TATGATGAAA AAGGGAATAA GTTAACGGAA ACGGATGCAC TAGGGAATAC CACTTATTAT ACCTATGGTA AATTGAATCG TTTATTAAGT GAAACCGATG CTAAGGGAAA TACAACCACC TATGACTATG GAGTCCGTAC AGGTAATTTA TTGTCCACAA AAGATGCACT AGGAAATATT ACCAAATTCA GTTATGACAG TCGAGGAAAT CTGGTTAGTC TAACCGATGC AGCCAACAAC ATTACCAAAT TTGAATACGA TTTACAAGGA AACGTTACGA AAATTATTGA TGCCAATGGA CATGAAACCC ATTACACTTA TGATAGCAAT GGAAACCAAT TAACTGAAAG TAAAACTGTT ACTACTGCAC AAGGACTGGT AACAGTTTTG ACGCAGAATA CTTATGATAA ACAAGGCAAT CTTTTATCGG TAACAGATGC AGAAAATAAC CCCACTTATT ATGAATATAA TGAGTTAAAT CAACAAACAG CAGTCACAGA TACACTCTTA AGAAAAACCG AATACCGTTA TGATAACAAA GGACAATTAG TAGAAACCAT TTATCCTGAT AGCACTCCTA ATAATAACGC TGATAATCCC AGAACGATTA CGGTTTATGA CAGAGGAAGT CGTCAAAAAG CGACCATAGA CCAAGCAGGA AGAGTCACTT ATTATAATTA TGATCAATTA GGCAGATTAA TTGAAACCAT TTATCCTGAT GAAGTTGATA CTTTAAGTCA ATTTGTTAGT TTTCTCGATA GTAGTAAGAC TGTTACTACG ATTGATTGGA CAGAGGTAAT TTATCCTGAT AGTAATCCCA GTTATTTAAG TGATAATCCT CGGACTCAGA CTGAATATTA TCAAGATGGA CAAGTTAAAG CGAATATTAA TGAAAGGGGT TATAGAACTG AGTATATTTA TGATGCAAAT GACCAATTAA TTGAGATTAT TTATCCTGAA TTAGAATATA ACCCAGGAAT TAACTTTACG ACAACTTCTA CCTATGATGT AGTAGGAAGA AAAATTGCTG AAACTGATGG GTTAGGACGA ACAACTAACT ATGTTTATGA TGAATTAGGA AGACTCACCA AAACCCTATT TGCTGATGGA ACCTTTACCA CTTCTACCTA TGATAAATTA GGACGAAGAA TTACCACCAC TGACCAAGAA GGAAAGGTAA CTAATTATGA ATATGATTCA TTAGGACGCT TAACAGATGT GGTTCAATAC CTCAATCAAA ATAGTCTTAA TCCTACAGAA ATTAGAACCG AATATGGTTA TGATGAACTA GGTCGTTTAA TCTGGGTTGA AGATGCTAAT GACCACAAAA CTAACTATGA ATATGATAAA TTAGGTCGTC GAACGGACAT AGAATTACCA TTAGGACAAC GTTCGACAAC GAGTTATGAT GAAGTCGGAA ATATTGAGAC GGTAACAGAT TTTAATGAGA AGATAATTAC CTATTTCTAT GATGAACAAA ACCGTCTAAT TAAGAAACTG TTTGCTGATA ATAGTTCCGT TGATTATACT TATACATTAA CAGGATTACG AGAAACGATT ACAGATAGTC GAGGAACTAC GACTTATACT TATGATGAAC GAGATAGATT AATTGCTCAA ACTGACCCTA CTGGAGTGTA TTTAAACAGT GGAAATACTC TTGAATATAG CTATGATTTA ACAGGAAATA GAACCTCTGT TACTACCCCA TCGGGAACCG TTTATTATAC CTTCGATGAA TGGAATCGTT TAAAGACGGT AACAGACGCA GATAATCATC AGACCATTTA TGTCTATGAT GGGGTCAGTA ATTTAATTGA AACTACTTTC TCTAATGGAG TTATAGAAAC AAGAGATTAT GATGACTTAA ATCGATTAAT CAAGTTAGAG AATAAGTTAG GTAATCAAGT TATTTCTGGT TATGAATATA CGTTAGATAA AGTGGGTAAT CGTCTTAAAG TCAAAGAAGC AGATGGAAGG ATTGTTGAGT ATGAGTATGA TGATTTGTAT CGGTTAATTG AAGAAAAAAT TACGGATTCA TTGGATACGG TTAATGATGG AAGAGTGATT AGTTATACCT ATGATGCGGT GGGGAATCGG TTAACTAAGG TTGATTCGGT TGAAGGGACA ACTACTTATG ATTATAATGC TAATGATTGG TTATTAACTG AAACTGAAGA GAATGGAGAC GTTAAAGAAT ATGAATATGA TGAGACGACT TTTTATCAAG TAGATGGGTT AGGGAGTACG AGAATTTTAA CTAATGAAAA GGGAGAATTA ATTAACACTT ATGATTATGA TGCGTTTGGT AATTTAATTG AATCCACAGG AGATATTGAG AATAATTATT TATTTGCAGG GGAACAGTTT GATGAGAATT TAGGGGAGTA TTATTTAAGG CAAAGATATT ACAATCAGGA AGTTGGGAGG TTTACAAGAA GGGATACTTA TGAGGGGAGT TTAAATAATC CTGTTTCTCT GCATAAGTAT CTTTATGCTA ATGCTAATCC TGTTATTTAT ATAGATCCAA CAGGATTATA TACATTAACT GAGTTTAGTG CTGGACAAGC TATTGCAGAT GCTTTAGCCA TAAGTCTAGG AATTTCAGGT TTCATCTCAA ACTCTTACAA CCCTGAACGA CTTGGCGGTT TTGGCGAGAA TGAAAAACCA AGCACTGTAC TAGATAGACT GCTAATCTGG AGAAATACAT GGGCCCCTGA GTCTATAGGT GGTTTTGGGG AAAATCTACA ACCTACTTTT CCTAATCATA CAGGGCATTC AAATCGTGAC ATAAATGACT TAATTAGATA TATTTTTGCA ATTAGTGATC CTTTCGAGCT ATCTAACGAC ATCGCTTATG GTCATGCTTG GAATGCAGCT AGAAACTTGG AATGGGCGAA ATTAGGTATA AACAGTCAAC AACAACTAGC AGATCTTATT TATGACATTG TAATTTTTTA TGAACAAAAG AAAGTAGATG GAGATAAAAT TATTTATCTT GGTAGTGACG GTACAATTGT CATTGATAAT CCCAGAGATC CTGACGGTGG TACAGCTTTT AATCCCAATA TACAGCAAGG AAATTCGCAA GCATCTCAAA TTTACTTCGA TGAGCAACCA GGTCGAGTAG TGGACTAA
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Protein sequence | MTTTLEVLDF NDVDAPIINF PRLANNTITS PIEIIGTVTD YDEDNHDTLQ YYTLEVAKLG TDDFQEVFKG TKSVNNGVLG IFDPSLLEND AYTLRLKAVD RGGNLVFEER TINVEGDLKL GNFQLSFTDL SIPVAGIPIS ITRTYDTLTA QERDDFGYGW RLEFRDTNLR TSLGKDDYYE TFDIIGQGFK EGDKVYLTLP GGKREAFTFK PELDRLGAFL QGAAAGLGLG EDPGLYHPKF VSESDSNNVL TVKDVLIIRT ANGDFAGLAG NLYNPVDPYF GGQYTLTTGE GIVYEIEAET GDLLTVTDTN NNRLTFSENG IKSETGVEVK FNRDAKGRIT SIVDPMGNVI KYDYDGHGDL IKVIDREENE TKFDYSEERK HYLERIIDPL NREAVRTEYD ETGRLKKVID VNGEAVELVY DVDNSTQTTK GEEGYTTTYT YDEKGNKLTE TDALGNTTYY TYGKLNRLLS ETDAKGNTTT YDYGVRTGNL LSTKDALGNI TKFSYDSRGN LVSLTDAANN ITKFEYDLQG NVTKIIDANG HETHYTYDSN GNQLTESKTV TTAQGLVTVL TQNTYDKQGN LLSVTDAENN PTYYEYNELN QQTAVTDTLL RKTEYRYDNK GQLVETIYPD STPNNNADNP RTITVYDRGS RQKATIDQAG RVTYYNYDQL GRLIETIYPD EVDTLSQFVS FLDSSKTVTT IDWTEVIYPD SNPSYLSDNP RTQTEYYQDG QVKANINERG YRTEYIYDAN DQLIEIIYPE LEYNPGINFT TTSTYDVVGR KIAETDGLGR TTNYVYDELG RLTKTLFADG TFTTSTYDKL GRRITTTDQE GKVTNYEYDS LGRLTDVVQY LNQNSLNPTE IRTEYGYDEL GRLIWVEDAN DHKTNYEYDK LGRRTDIELP LGQRSTTSYD EVGNIETVTD FNEKIITYFY DEQNRLIKKL FADNSSVDYT YTLTGLRETI TDSRGTTTYT YDERDRLIAQ TDPTGVYLNS GNTLEYSYDL TGNRTSVTTP SGTVYYTFDE WNRLKTVTDA DNHQTIYVYD GVSNLIETTF SNGVIETRDY DDLNRLIKLE NKLGNQVISG YEYTLDKVGN RLKVKEADGR IVEYEYDDLY RLIEEKITDS LDTVNDGRVI SYTYDAVGNR LTKVDSVEGT TTYDYNANDW LLTETEENGD VKEYEYDETT FYQVDGLGST RILTNEKGEL INTYDYDAFG NLIESTGDIE NNYLFAGEQF DENLGEYYLR QRYYNQEVGR FTRRDTYEGS LNNPVSLHKY LYANANPVIY IDPTGLYTLT EFSAGQAIAD ALAISLGISG FISNSYNPER LGGFGENEKP STVLDRLLIW RNTWAPESIG GFGENLQPTF PNHTGHSNRD INDLIRYIFA ISDPFELSND IAYGHAWNAA RNLEWAKLGI NSQQQLADLI YDIVIFYEQK KVDGDKIIYL GSDGTIVIDN PRDPDGGTAF NPNIQQGNSQ ASQIYFDEQP GRVVD
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