| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4216 |
|---|
| Symbol | |
|---|
| ID | 7104628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 4420942 |
|---|
| End bp | 4421943 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643477200 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002374299 |
|---|
| Protein GI | 218248928 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAA ATATTTTAAT TGAATTAGGC AATTTTTTAC ACAAAATTCG GACTAGGAAA
GGATTATCCC AAGAGTATCT TGCGGAACTT GCTGACCTAG ATAGAACTTA TATTAGTCTT
CTTGAAAGAG GGAAAAGAAA TCCGTCTCTT ACTTGTATCA ACTCAATTTT TCAAGCATTA
GATATAGATA TAATTGAAAT TTTTCAATTA TTCGATTACA CAAATAAAAT CAATCAACTT
AGTCAATTTT GTCAATCTTA CGATTTAGAA TTTGAATACC TTGCTGAAGT TCTCAATGAT
CCTAAAGTTA TTCCGATGAT TCGGGGGAAA TCATTTGAAT TTACTGTTAA AAAATATATT
TCACAAATTT TATCACCCCA AAAATATGAA ATTACTAATC CTCGTCTGAA TGCTCAAACA
GGAGTTAAAG ATGTTGATGT TATGATTATC AATAAAGAAA GTAATCAAAC ATATACAGTG
GAATGTAAAT TGGCTGCTAA AGGAAGTTTT AGAACTAATC CTAAAGCAAA TCCTTATCTC
AAAGTCAAGT GTATGAGATC AAGAACTTTA GGACAAGAAG CAGCACAGCA AAGAGCTAAT
AGTACAGGAT TATCTCATGA GTTATGGTCA ATTCATAGCG ATCAGTATCG ACAAGAAGAT
TTTGATTTTG TAGTAACTTC TATTGCTAAT GTTTTCTATG AAACAACTGA TGATGGTTTA
TATCAATGGA AACCGGATCA AGAAGCTGAA TTATTTTTAA GTAAGCTAGG AATAACTAAT
CAACAACAAG CTTTTCAAAC AATGTTAATT GCTAGAAGTA GAGAATTAGT ATCTAATCAA
CCCAATAGAA TTTTATATAA TGTCAACTGC ACTCGTTTAA AGTGTAAAAA TCCTAATTGC
GGTTTTATTC CTAACTATCC ATTTATTTAC TTTAATATTG ATACTGGAAA ACCCCTTGCT
CCTTGGATAT ACTTAGATCA ATTAGAAACT TTATTGATCT AA
|
|---|
| Protein sequence | MDANILIELG NFLHKIRTRK GLSQEYLAEL ADLDRTYISL LERGKRNPSL TCINSIFQAL
DIDIIEIFQL FDYTNKINQL SQFCQSYDLE FEYLAEVLND PKVIPMIRGK SFEFTVKKYI
SQILSPQKYE ITNPRLNAQT GVKDVDVMII NKESNQTYTV ECKLAAKGSF RTNPKANPYL
KVKCMRSRTL GQEAAQQRAN STGLSHELWS IHSDQYRQED FDFVVTSIAN VFYETTDDGL
YQWKPDQEAE LFLSKLGITN QQQAFQTMLI ARSRELVSNQ PNRILYNVNC TRLKCKNPNC
GFIPNYPFIY FNIDTGKPLA PWIYLDQLET LLI
|
|---|
| |