Gene PCC8801_4078 details

Gene Information

• Locus tag: PCC8801_4078
• Symbol: rimM
• ID: 7101875
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: -
• Start bp: 4273494
• End bp: 4274054
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643477071
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_002374170
• Protein GI: 218248799
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAATT CAGAAAGTTG GTTAGAAATT GGCAGAATTG TTGCTGCACA AGGGTTAAAA 
GGGGAATTAA AAGTGATGTC TAGTTCAGAT TTTCCTGAAA GGTTTGAAAA ACCGGGGACA 
AGATGGCTAC AATCTCCTGA TAGGTTATCA ATTCAAGAAG TTGAATTAGT TCGGGGTCGA 
TATGTCCCTG GAAAAAACCT TTATGTGATT AAATTAGCCG AAATAGCCGA TCGCACTCAA 
GCAGAAACCC TAAGAGATTA TACCTTATTA GTTCCTAGCA GTGATCGCCC CCAATTAAAT 
GAGGGTGAAT ATCATGTTTC AGATTTAATT AACCTAACAG TTTACCATCA ACAAACAGGG 
GAAGAAATCG GGGTAGTTAC AGATATGTTG TCAGCAGGTA ATGATTTATT AGAAGTGCAA 
TTAAACACCC TAAATAGTAG TGAAAATACA TCATCAAAAA AGGTATTAAT TCCCTTCGTT 
TATGAAATTG TTCCTGTTGT AGATTTAGTT AACAAACGCA TAGAAATTAA TCCTCCCGTC 
GGCTTATTAG AATTAAGTTA G 

 

Protein sequence

MDNSESWLEI GRIVAAQGLK GELKVMSSSD FPERFEKPGT RWLQSPDRLS IQEVELVRGR 
YVPGKNLYVI KLAEIADRTQ AETLRDYTLL VPSSDRPQLN EGEYHVSDLI NLTVYHQQTG 
EEIGVVTDML SAGNDLLEVQ LNTLNSSENT SSKKVLIPFV YEIVPVVDLV NKRIEINPPV 
GLLELS