Gene PCC8801_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4020 
Symbol 
ID7103503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp4211815 
End bp4212840 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content43% 
IMG OID643477015 
Productisopentenyl pyrophosphate isomerase 
Protein accessionYP_002374115 
Protein GI218248744 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID[TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACA CCCAGATCCG CAAAGACGAT CACTTGCGAA TTTGTCTGGA AGAAGACGTA 
CAATTTCGCC AACTCAGCAA TGGGTTAGAA CGCTATCGCT TTACCCACTG TTGCTTACCA 
GAGTTAGATT TTAACGAAAT TGACCTCTCT ACAACGTTTC TGGGAAAATC TTTAGAAGCA 
CCTTTGCTGA TTTCTTCCAT GACAGGAGGA ACCCCACAGG CAAAAATGAT CAATTTTCGC 
CTCGCAGAAG TGGCTCAAAC CTATAGACTA GCCATGGGAG TCGGTTCTCA ACGGGTAGCA 
GTGGAAAAAC CCGAAGTTTG TGATACCTTC ACGGTACGCT CTGTTGCTCC AAATATTCTT 
TTATTGGCTA ATTTAGGAGC CGTGCAGCTT AATTATACCT ATGGAATAGA AGAATGCTTA 
AAAGTCGTTG AATTATTACA AGCTGATGCC CTTATTCTTC ATATTAATCC CCTGCAAGAA 
TGTATTCAAA CCAAAGGAGA TACAAATTTT AAAGGATTGC TTGACAAAAT AAACAAAGTA 
TGTTACTCAC TACCCGTTCC CGTAATTGCT AAAGAAGTGG GTAATGGCAT ATCCCAACCC 
ATGGCGCAGA AGCTAATTGA AGCTGGAGTG AGTGCCATCG ATGTTGCCGG AGCAGGGGGA 
ACCTCTTGGG CAAAAGTCGA AAGTGAGCGG GCAACAAACC CTTTAAAACG GAAACTAGGA 
CAAACCTTTG CAGATTGGGG CATTTCCACC GCAGATTGTC TCACAGAAAT CCGACGATTT 
CACCCAGAAA TTCCTTTAAT TGCCTCTGGA GGGTTGCGTA ATGGCTTAGA CGTAGCTAAA 
GCGATCGCCC TAGGAGCCGA CTTAGGGGGT TTAGCCTTTC CCTTCCTACA AGCTGCCTCC 
GAGTCTCCAC AAACCCTTGA GGAGTTAGTT GAGTTACTAA TAGCCGAAAT TAAAACAGTC 
CTATTTTGTA CAGGAAATGC CAACTTATCT GACTTAAAAA TTACCCCCAG ATTAAGAGAA 
ATTTAA
 
Protein sequence
MSNTQIRKDD HLRICLEEDV QFRQLSNGLE RYRFTHCCLP ELDFNEIDLS TTFLGKSLEA 
PLLISSMTGG TPQAKMINFR LAEVAQTYRL AMGVGSQRVA VEKPEVCDTF TVRSVAPNIL 
LLANLGAVQL NYTYGIEECL KVVELLQADA LILHINPLQE CIQTKGDTNF KGLLDKINKV 
CYSLPVPVIA KEVGNGISQP MAQKLIEAGV SAIDVAGAGG TSWAKVESER ATNPLKRKLG 
QTFADWGIST ADCLTEIRRF HPEIPLIASG GLRNGLDVAK AIALGADLGG LAFPFLQAAS 
ESPQTLEELV ELLIAEIKTV LFCTGNANLS DLKITPRLRE I