| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3570 |
|---|
| Symbol | |
|---|
| ID | 7105792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3720182 |
|---|
| End bp | 3722203 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643476580 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_002373689 |
|---|
| Protein GI | 218248318 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATTA AAGATAAATT TCAACTCCTT CCGATCCCTC CTGTGGGAAG TCTTCTGTTA
GCCTCAGCAG GAGTCGTCGT CTTAGCCTCC ATGTTGTGGC CGCGATCGCC GAAAATTCCC
CTAAAACCCT ACAGTCAATT CCTTGATCAA GTCGAACAGG ATCAGGTATC GTGTGTTCGA
GTAGAACCCA ATCGCATCAT TTATCAGCTT AAAAGTCCCT TAGATGGACT AGGAACCGCC
GAAGTCCCCC TTACTCAACC GAATACCTCT CCCTTAGAAC CAAAATCTAC TAACCCCTTC
TATAGTAGTC CTAATAACCC AACGGAAACT CCTGACCATC AAGTCACCAA TCGCTGCGAT
CTCACCCAGT TAGACGGAGT TTTTAGTACA GTTCCCCTCA ATGATCCCGA ATTACCCAAA
ATACTGCGAC AAAGAGGCAT TTTATTCGGT GCAGTACAAC CAGAAGGGAA CTTTATGATG
ACCCTGTTAG CTTGGGTTGT TCCTCCCTTA ATCTTAGTCC TAGCCATGCA ATTTTTGCTC
TATCGCAACG AAGATCGCCA TTCTTTAGCG TTTAGTAAAA GTAAAGCCAA AGTGTATGTC
GAAGGGGAAG AAGCGCGAAT TACCTTTAAT GATGTCGCTG GTGCAGAAGA AGCCAAGACC
GAATTAGTCG AAATTGTCGA ATTTCTTAAA AATCCTGAAC GGTTCAGTAA AATTGGGGCA
AGAATCCCCA AAGGTGTATT ATTAGTTGGA CCCCCAGGAA CAGGGAAAAC CCTCTTAGCA
AAAGCCGTCG CGGGGGAAGC AGGAGTAACG TTTTTTAGTA TTTCCGCTTC CGAATTTGTC
GAATTATTCG TCGGGACTGG TGCAGCTAGA GTAAGAGATT TGTTTGAACA AGCCAAAAAA
CAGGCTCCCT GTATCATTTT TATCGATGAA TTGGATGCGA TCGGTAAATC CCGCAGTGGA
GGGAATAGCC TTAGCGGTAG CAATGACGAA CGCGAACAAA CCTTAAATCA GCTTCTAACC
GAGATGGATG GCTTTAATGC GGGGGATGCC ACGGTTATCG TTTTAGCTGC CACCAATCGT
CCAGAAACCC TCGATCCTGC CCTATTACGA CCAGGGCGGT TTGATCGCCA AGTATTGGTC
GATCGCCCCG ATTTAGCCGG ACGCTTAGCG ATTTTAGAGA TCTATGTCAA GAAAATTCAG
CTAGGGGAAG GGGTCAACCT AAAGGATCTC GCTACCCAAA CCCCCGGCTT TGCCGGCGCA
GATTTAGCTA ATTTGGTCAA TGAAGCCGCT TTATTAGCCG CCCGTAATCA ACGAGATTAT
GTCACCCAAA GGGATTTTAA GGAAGCGATC GAGCGTGTGA TAGCAGGTTT AGAGAAAAAA
AGTCGTGTTT TGAGCGATCG CGAGAAAAAA GTCGTCGCTT ATCACGAAGT CGGTCACGCT
TTGATCGGTG CAGTAATGCC CGGAGGGGGC AAAGTGTCTA AAATTTCCAT TGTTCCCCGT
GGCTTATCAG CCTTGGGCTA CACTTTGAAA ATGCCCACAG AAGACCGTTT TTTGATGAGT
GAGACGGAAT TTCGGGAGCA AATTGCTATG CTATTAGGGG GACGGGCAGC CGAGGAGATT
ATCTTTGGCA GTGTGACCAA TGGAGCTTCG GATGACTTGC AACGGGCGAC GGATATTGCC
GAACGCATGG TCAGTACCTA CGGCATGAGT AAGGTTTTAG GTCCTTTAGC CTATGATAAA
CGTCAACAGA ACAACTTTTT GGGCAATGGC GGCGAAAATT TACGCCGTAT GGTCAGTGAG
GAAACGGCTA AGGCGATCGA TGAGGAAGTC AAACAAATTG TTCAAGGGGG ATATGAACAA
GCTTTAGCAA TTCTTAATCA TAATCGGGAA CTTTTGGAAA AAATCAGTCA AAATCTCCTA
GAAAGTGAGG TCATTGAAGG GGAAGAATTA CAAGAACTAC TTGATCAAGT TCAATCTCCT
GACCCTTCGT TACGCCCTCA ACTATCAGAG CTGAGGGGGT GA
|
|---|
| Protein sequence | MGIKDKFQLL PIPPVGSLLL ASAGVVVLAS MLWPRSPKIP LKPYSQFLDQ VEQDQVSCVR
VEPNRIIYQL KSPLDGLGTA EVPLTQPNTS PLEPKSTNPF YSSPNNPTET PDHQVTNRCD
LTQLDGVFST VPLNDPELPK ILRQRGILFG AVQPEGNFMM TLLAWVVPPL ILVLAMQFLL
YRNEDRHSLA FSKSKAKVYV EGEEARITFN DVAGAEEAKT ELVEIVEFLK NPERFSKIGA
RIPKGVLLVG PPGTGKTLLA KAVAGEAGVT FFSISASEFV ELFVGTGAAR VRDLFEQAKK
QAPCIIFIDE LDAIGKSRSG GNSLSGSNDE REQTLNQLLT EMDGFNAGDA TVIVLAATNR
PETLDPALLR PGRFDRQVLV DRPDLAGRLA ILEIYVKKIQ LGEGVNLKDL ATQTPGFAGA
DLANLVNEAA LLAARNQRDY VTQRDFKEAI ERVIAGLEKK SRVLSDREKK VVAYHEVGHA
LIGAVMPGGG KVSKISIVPR GLSALGYTLK MPTEDRFLMS ETEFREQIAM LLGGRAAEEI
IFGSVTNGAS DDLQRATDIA ERMVSTYGMS KVLGPLAYDK RQQNNFLGNG GENLRRMVSE
ETAKAIDEEV KQIVQGGYEQ ALAILNHNRE LLEKISQNLL ESEVIEGEEL QELLDQVQSP
DPSLRPQLSE LRG
|
|---|
| |