| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3541 |
|---|
| Symbol | |
|---|
| ID | 7105692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 3691884 |
|---|
| End bp | 3693437 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643476553 |
|---|
| Product | NAD(P)H-quinone oxidoreductase subunit 2 |
|---|
| Protein accession | YP_002373662 |
|---|
| Protein GI | 218248291 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTT CTAGTACCAT TGCCAGTCAA CTGAACGCCG GAACAATTCT GCCAGAAGGA
ATTGTAATTA TTACTCTGGT TGGCGTTCTC GTTGGCGATC TCATTTTTGG ACGTAGTTCT
AAGAGTTGGC TGCCCTATAT GGCCATTATT GGGTTATTAG CCTCGATTGT AGCCCTCTAT
TTAGCCTGGG ATAGCCCTCA CCCCATCGGG TTCTTAAACT CTTTCAATAG CGATAACCTC
AGCATTGTTT TTCGGGCAAT TATCGCCCTT TCTACCGCCG TTACTATTTT AATGTCTATT
CGCTATGTGG AACAGACAGG GACATCCTTA GCGGAATTTA TCGCCATTAT GCTAACGGCA
ACCCTAGGGG GAATGTTCCT CTGTGGGGCT AATGAATTGG TGATGATTTT CATCTCCCTA
GAAATGCTGA GTATCTCCTC TTACCTGATG ACGGGATACA TGAAGCGTGA CCCTCGTTCC
AATGAGGCGG CCTTAAAATA TCTGTTAATT GGGGCTTCTA GTTCCGCCAT TTTCCTCTAC
GGAGTCTCCT TACTCTATGG ATTATCAGCA GGAGAAACTG CCCTCGATGC CATTGCTACT
AAGATTGCCG CAGCTAATGG TGGGGAATCT TTAGGACTGG CTATTGCCCT AGTGTTTGTT
ATTGCCGGAA TTGCCTTTAA AATTTCTGCG GTTCCTTTCC ACCAATGGAC TCCCGATGTC
TATGAGGGTT CTCCCACTCC TGTGGTTGCT TTTCTCTCTG TGGGGTCGAA AGCGGCCGGG
TTTGCTTTGG CAATTCGCTT GTTAGTCACT GCGTTTGCTT CTGTTGGCGA AGAATGGCAT
TTTGTCTTCA CCGCGTTGGC TATTCTGAGT ATGGTACTCG GTAATGTAGT AGCCTTGGCA
CAAACTAGTA TGAAGCGGAT GTTAGCCTAT TCTTCCATTG GTCAAGCGGG TTTTGTCATG
ATTGGTCTGG TGGCTGGAAC CGATGCAGGA TACTCTAGTA TGGTGTTCTA CCTCTTGGTT
TATTTGTTTA TGAACCTAGG GGCATTTGCT TGTATCATTC TCTTTTCCCT GCGCACCGGA
ACAGATAAAA TTAGCGAATA TGCGGGACTG TATCAGAAAG ATCCTTTATT GACCTTGGCT
TTAAGTATCT GTTTACTGTC TTTAGGCGGC ATTCCTCCCC TAGCGGGCTT CTTTGGTAAA
ATTTATCTGT TCTGGGCTGG TTGGCAAGCA GAACTCTACG GACTGGTTAT TTTAGGATTA
GTCACCAGTG TGGTATCCAT TTATTACTAC ATCCGTGTCG TAAAAATGAT GGTGGTCAAA
GAACCTCAAG AGATGTCCGA TGCGGTGAAA AATTACCCTC AAATTCGTTG GAATTTACCG
GGAATGCGTC CCCTACAAGT GGGTATTGTT TTAACCCTCA TTGCGACTTC TCTGGCGGGA
ATTTTATCGA ATCCTTTGTT TACTTTAGCC AATGATTCGG TAACCAGTAC TCCCATTTTA
CAGTCAGCGA TCATCAATAC TCGAATTTCA CAAGTCCCCA CCGAGTCTAA ATAG
|
|---|
| Protein sequence | MDFSSTIASQ LNAGTILPEG IVIITLVGVL VGDLIFGRSS KSWLPYMAII GLLASIVALY
LAWDSPHPIG FLNSFNSDNL SIVFRAIIAL STAVTILMSI RYVEQTGTSL AEFIAIMLTA
TLGGMFLCGA NELVMIFISL EMLSISSYLM TGYMKRDPRS NEAALKYLLI GASSSAIFLY
GVSLLYGLSA GETALDAIAT KIAAANGGES LGLAIALVFV IAGIAFKISA VPFHQWTPDV
YEGSPTPVVA FLSVGSKAAG FALAIRLLVT AFASVGEEWH FVFTALAILS MVLGNVVALA
QTSMKRMLAY SSIGQAGFVM IGLVAGTDAG YSSMVFYLLV YLFMNLGAFA CIILFSLRTG
TDKISEYAGL YQKDPLLTLA LSICLLSLGG IPPLAGFFGK IYLFWAGWQA ELYGLVILGL
VTSVVSIYYY IRVVKMMVVK EPQEMSDAVK NYPQIRWNLP GMRPLQVGIV LTLIATSLAG
ILSNPLFTLA NDSVTSTPIL QSAIINTRIS QVPTESK
|
|---|
| |