Gene PCC8801_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3460 
Symbol 
ID7103144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp3613997 
End bp3614749 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content44% 
IMG OID643476474 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002373583 
Protein GI218248212 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCTC TGGACTTAGC TGAGTCTTCA TCCTTAGAGA AAATCGTCCC TAACCATCGA 
ATTTTAGTCG TTGAAGACGA GGATGTGATT CGGGATATGA TCACCATCGC CTTAGAAGAA
CAAGGCTACG AAGTGATAAC AGCAAGCGAT GGACGAACCG CTTTAAGCTT ATTACAAGAT
GTTGCCACCC TAGGAACTGA GTCAGGTTTT GACCTAGTGG TACTGGATTT GATGTTACCT
CAGGTTAACG GCTTAGATAT CTGCCGTCTG CTACGTTATA ATAACAATAT TGTACCTATT
CTGATACTCA GTGCCAAAGC CAGCGAAACC GACCGGGTAC TAGGATTAGA AGTAGGAGCC
GATGATTATC TAACGAAACC CTTTAGTATG CGCGAGTTAG TCGCGCGGTG TCGTGCTTTA
ATTCGTCGTC AAGACTTTAA CAACGTTTCC TCCGCCCCAG TTCGTAAGTT CAAAGATATT
AGCCTTTATC CCGAAGAATG TCGGGTAGTT GTTCGTGGAG AAGAAATTAA CCTTTCTCCT
AAAGAATATC GTCTATTAGA GCTATTTATG AGTTATCCTC GTCGGGTTTG GTCCCGTGAA
CAGTTGATTG ATCAAGTGTG GGGGGCTGAT TTCCTAGGAG ATACCAAAAC CGTTGATGTT
CATATTCGTT GGTTACGCGA AAAATTAGAA ACCGATCCCA GTCAACCAGA ATATCTCATT
ACAGTACGAG GATTTGGCTA TCGCTTCGGG TAA
 
Protein sequence
MLSLDLAESS SLEKIVPNHR ILVVEDEDVI RDMITIALEE QGYEVITASD GRTALSLLQD 
VATLGTESGF DLVVLDLMLP QVNGLDICRL LRYNNNIVPI LILSAKASET DRVLGLEVGA
DDYLTKPFSM RELVARCRAL IRRQDFNNVS SAPVRKFKDI SLYPEECRVV VRGEEINLSP
KEYRLLELFM SYPRRVWSRE QLIDQVWGAD FLGDTKTVDV HIRWLREKLE TDPSQPEYLI
TVRGFGYRFG