Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_3443 |
Symbol | |
ID | 7103133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 3590406 |
End bp | 3592325 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643476458 |
Product | Polypeptide-transport-associated domain protein ShlB-type |
Protein accession | YP_002373567 |
Protein GI | 218248196 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCTCA GCGTAATAGT CTGGCTGAGT AGCGGTCGTT ATGGAGAGAC GACAGAAGTC ATAGGTACTA GGAGTGGGTT TGATAACGAA GTCAGAAGTC AGAAGTCAGA AGTCAGGAGT AGTTTTTGTA ATGAGGATTT AAACACTGCT CCAAAAACTT TCTGTTTTCA AAGGCAGGGT TTTAGACACA ATTTTTTTGA CAATTTAGTA CATAAAAAAA TAATAAATCT TGAAAAACTT GCCAGTACAG GAGTTAGCAG TCTGGGCGAA CAGCCGTTCG CCCCTACGGT CATTGCCAGG GACCCTCTCT CCCCCTCTCC CCCTCCCCCT CTCCCCCTCT CTCCCCCTGA GTCCCCTCCC CCCCTCTCAG TTCCCTCCCC TTCCCTTCCC AACGAAGACA ATTTAATCAA TATTCCAGGG ACAATTACGG TCAAAAAGTT TGATTTTGCG GGTAATACGG TCTTTAGTCA GGAAGAATTA GCCGAGGTTA CTGCGCCTTT TGTTGATCGT CCCCTTACCT TTGCTGAATT GCTTCAGGCG CGATCAGCCG TGACGAAGTA TTATGTAAAC AATGGGTATG TCACTTCTGG GTCTTATATT CCTCCTCAAA CCATTGAAAA TGGCGTTGTT ACGATTCAAA TTGTTGAGGG GTCTTTAGAG GATATTAATG TTAACGTTGA GGGAAAACTC AACCCCAATT ATATCCGCGA TCGCTTAGCC TTAGCTGGAG AGACTCCTCT TCATCTTCCG ACTCTCCTTG AGTCCTTACA ATTGCTACAA TTAAGCCCTT TAATTGATAG TATTTCAGCA GAATTATCAG CCAGCCCCCG TCCGGGGAGC AATTTATTAA CTGTTAAAGT GGTCACAGCG CAATCATTTT ATCCTAAGTT AATCTTGGAT AATGGACGTA ACCCCCAAGC AGGAGAAATT CGTCGCGGTT TTGAGCTTTC GGAACTCAAT TTAACAGGAA TCGGTGATAA GATTAGGACA ACCTATTACA ATAGTGATGG GAGCGATGAT TTTGAGGTAA CGTATCAAGT TCCCTTTACG ATTTATGATA GCACTGTTGA ATTTGGTTTT AGACATTTAA GCGGCGAAAT TCTAGAAAAA CCTTTAGATG TTTTAGAGCT AAATTCTGAT TATCAAAAGT ATTCTTTGAG ATTTCGTCAA CCGATTATTA AAACCCCTAA TCAAGAGTTT TCTATTGGAC TAGATCTTGA TCATCAAAAA AGTAAAACTG TTTATTTAGA TGGACTTGCT TTTCCGGGTC GGGGGTCAGA TACGGATGGA AGAACCCATA TTTCTACCCT GAGATTTTCT CAAGAATGGG TAGGAAGAAC GGAAGAACAG GTACTCGCTT TACGGTCACA ATTTGATTGG GGTTTAGAAG CATTGGGGAC AACAACTCCC TATGATATTA ATGTTAATCC AGCAACCCCT GAAGCGACTT ATTTTTTATG GCGAGGACAA GGACAATGGG TACAAGTTTT AGCCCCTGAT ACATTATTTG TTATTCGTAC AGATATCCAA ATAGCTGACC GTCCAATTGT TTCTTTAGAA CAGTTTTCTT TAGGGGGTTT AGAGAATGTA GAAGGCTATC GTCAAAACTC TCTTTTAACA GATAATGGTG TTTTTGCTGC TATGGAACTT CGTTTTCCTA TTTTTCGCCT TCCGAGGGAA AATTTAGTAC TTCAATTGAT TCCGTTTGCT ACCTATGGTC AAGGGTGGAA TAGTGGCTTA TCTCCTGATC CACCCATTAA TGAATTAGCC TCTATTGGGC TAGGGTTTCA GATTCAATAT AATAATATTT TTAGTGCTCG TATCGATTGG GCTCATCCCT TAGGAAAGGA TATTTTTCTT GAGGGGAGTT CTTTACAAGA TCAAGGAATT AATTTTACTA TTAATATTAG TCCGTGGTAA
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Protein sequence | MFLSVIVWLS SGRYGETTEV IGTRSGFDNE VRSQKSEVRS SFCNEDLNTA PKTFCFQRQG FRHNFFDNLV HKKIINLEKL ASTGVSSLGE QPFAPTVIAR DPLSPSPPPP LPLSPPESPP PLSVPSPSLP NEDNLINIPG TITVKKFDFA GNTVFSQEEL AEVTAPFVDR PLTFAELLQA RSAVTKYYVN NGYVTSGSYI PPQTIENGVV TIQIVEGSLE DINVNVEGKL NPNYIRDRLA LAGETPLHLP TLLESLQLLQ LSPLIDSISA ELSASPRPGS NLLTVKVVTA QSFYPKLILD NGRNPQAGEI RRGFELSELN LTGIGDKIRT TYYNSDGSDD FEVTYQVPFT IYDSTVEFGF RHLSGEILEK PLDVLELNSD YQKYSLRFRQ PIIKTPNQEF SIGLDLDHQK SKTVYLDGLA FPGRGSDTDG RTHISTLRFS QEWVGRTEEQ VLALRSQFDW GLEALGTTTP YDINVNPATP EATYFLWRGQ GQWVQVLAPD TLFVIRTDIQ IADRPIVSLE QFSLGGLENV EGYRQNSLLT DNGVFAAMEL RFPIFRLPRE NLVLQLIPFA TYGQGWNSGL SPDPPINELA SIGLGFQIQY NNIFSARIDW AHPLGKDIFL EGSSLQDQGI NFTINISPW
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