Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_3265 |
Symbol | |
ID | 7104103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 3414024 |
End bp | 3415673 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643476284 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002373394 |
Protein GI | 218248023 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT CCCCTAATTC TTCCCATGAA AACCTGGACT ATCAGCAACC AGTGAACGGT TCCATTTCTG AAATGGGGTC TGAAGTCTCC CAAGAAGACA TAACCTCAAT TTATGGGGGT GTCGTTGGGT CTAGCCTACC GATATCTTCT ATGGGGGTAT CTTCGGCCTA TCCTCTCCCG ACTCCCCAAA CCGAACCCAA GGTGACAGTC CCCCGTTGGT CTCCATCCGT CCACGATCTT CTAGACCAGC CCCCCGCTAG TTTACCCCAA CGGTTAATCT ATGGGGGGAT CGCCTTTTGT CTCGCTTTTG GAACTTGGGC TTGGTTTGGA ACCATCGAAG AAGTGGGTCA TGCTCAGGGA AAATTAATTC CCCAAGGAGA AACCTACAAA ATTCAACCGA TAGAACTGGG CAAAGTCAAA AGCATTGAGG TCAAAGCAGG GGAAGAAGTT CAGGCCGGCC AGGTCATTAT GGAATTGGAT ACGGAGTTAG CGCAAAAAGA AGTTGAGCAA CACCAACAAA TGCTCGCCGC TTATCAACTG GAGTTAGCGC AACAACAAAT GTTGTTAGAA AGGGTACAAT TAGAAGCCCA AACCCGCGCT GCCATGGCTT CAGCCGAACA AAATGCCCAA CGGTCAGCGA TCGCGTTAAC CCAAGAAAAA ATCGCCACGA CCCGTCACCT GTTGGGTCAA CAGCAGTCAG AAGCTTTGGC CTATCGCTCT CGACAACGGC AGTTACAACC CCTAACCTCA ACGGCTCACG AACGCTTAGA GCAGCTTCAA GGGGAAGTTC TCGCCCATCA AGCGCGATTA GAACGGTTAA AACCCTTAGA AGAAGAGGGG GCGGTTTCTC AAGATTATAT CTTTCAGGCT GAACAGGAAC TACGCCAAAC CCAACAACGC ATTACCCAAA GTGTACTGCA AGAAGTCCCC AGTACCCAAG AACAACTGTT TCAAGCGGAT CAGTCGTTAC GCGACTTACA ACGGCAGATA ACGGAAAATA AAGGGGATCT AACGGCAGCT TTTAAAGATG CGGAGCGACT TACGGCAGAA TTACATCAAA AACAAGCTCA GGCTGAACAA ATGCAGTTGG AAGCCCAACA GAAAGCCCAA GAACTTGAAG TTGCCATTAC CCAACTCAGA GGCAAAATCG CTGACACTCA AACCTTGCTC CTCGCTGCTC AAGCGAAGCT TAAGTATAAG TTTTTGAAGG CTCCTGTGGA TGGGGTTGTG TTGTCCTTGG ATGTGAAGCG TACCGGAGAA GTGATCGAAG CCGGGAAAAT TGTCGCACAA GTTGCGCCCA ATGGCGTTCC TTTGGTGTTA TCTGCGCTAC TGCCTAACCG TGAAGCGGGC TTTGTCGAAT TGGGAATGCC CGTACAGGTT AAGTTAGATG CCTACCCCTA TCAAGATTAC GGCATTGTTT CAGGCCAGGT AACGAAGATT AGCGAAGATG CTGAGTCTGA CGAAAAATTA GGGGAAGTGT ATCGGGTAGA AGTGGACTTA GATCGGGATT ATATCCAAGA CAATCAGCAA AAAATCGCTT TTAAAGCAGG TCAGACGGGA ACGGCTGACA TTGTTATTCG CCGCCGACGG ATTATTGATA TCTTAATCGA TCCTATTAAG AAAATCCAAG AAGATGGCAT CAAGCTGTAA
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Protein sequence | MKLSPNSSHE NLDYQQPVNG SISEMGSEVS QEDITSIYGG VVGSSLPISS MGVSSAYPLP TPQTEPKVTV PRWSPSVHDL LDQPPASLPQ RLIYGGIAFC LAFGTWAWFG TIEEVGHAQG KLIPQGETYK IQPIELGKVK SIEVKAGEEV QAGQVIMELD TELAQKEVEQ HQQMLAAYQL ELAQQQMLLE RVQLEAQTRA AMASAEQNAQ RSAIALTQEK IATTRHLLGQ QQSEALAYRS RQRQLQPLTS TAHERLEQLQ GEVLAHQARL ERLKPLEEEG AVSQDYIFQA EQELRQTQQR ITQSVLQEVP STQEQLFQAD QSLRDLQRQI TENKGDLTAA FKDAERLTAE LHQKQAQAEQ MQLEAQQKAQ ELEVAITQLR GKIADTQTLL LAAQAKLKYK FLKAPVDGVV LSLDVKRTGE VIEAGKIVAQ VAPNGVPLVL SALLPNREAG FVELGMPVQV KLDAYPYQDY GIVSGQVTKI SEDAESDEKL GEVYRVEVDL DRDYIQDNQQ KIAFKAGQTG TADIVIRRRR IIDILIDPIK KIQEDGIKL
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