Gene PCC8801_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3216 
Symbol 
ID7103943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp3359090 
End bp3360154 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content47% 
IMG OID643476238 
Productphotosystem q(b) protein 
Protein accessionYP_002373348 
Protein GI218247977 
COG category 
COG ID 
TIGRFAM ID[TIGR01151] photosystem II, DI subunit (also called Q(B)) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCA CCATACAAAC CCGAGAAAAT CTTTCTCTGT GGGAACGGTT TTGTCAGTGG 
GTAACTAGCA CCAATAACCG CCTCTATGTG GGTTGGTTTG GTGTTATCCT CATCCCCACC 
ATTTTAACCG CCACCATTTG CTTCATTATT GCTTTCATTG CGGCTCCTCC CGTCGATATT 
GACGGTATTC GTGAACCCGT AGCAGGTTCC CTCCTTTATG GTAATAATAT TATCTCTGGA 
GCCGTTGTTC CTTCTTCTAA CGCCATTGGA TTGCACTTTT ACCCCATTTG GGAAGCAGCT 
TCCCTCGATG AGTGGCTGTA TAACGGAGGC CCCTATCAAT TAGTCGTTTT CCACTTCCTG 
ATTGGTATTT TCTGCTGGAT GGGACGGCAA TGGGAACTCT CCTACCGTTT AGGGATGCGT 
CCTTGGATTT GCGTCGCCTA TAGTGCGCCT GTATCGGCAG CAACGGCCGT TTTCCTCATC 
TATCCTATCG GTCAAGGGTC TTTCTCTGAT GGAATGCCGT TAGGAATTAG TGGAACCTTT 
AACTTCATGT TCGTTTTCCA AGCAGAACAC AACATCTTAA TGCACCCCTT CCATATGTTG 
GGAGTTGCGG GTGTCTTCGG GGGTTCCTTG TTCTCGGCGA TGCACGGAAG TTTAGTGACC 
TCTAGCTTAG TACGCGAGAC AACCGAAACC GAGTCTCAAA ACTATGGTTA TAAATTCGGT 
CAAGAAGAAG AAACCTATAA TATTGTGGCT GCTCACGGTT ACTTCGGTCG CTTAATTTTC 
CAATATGCGT CCTTTAACAA TAGCCGTAGT TTACACTTCT TCTTGGGTGC TTGGCCGGTT 
ATTGGTATTT GGTTTACCGC AATGGGGGTC AGTACCATGG CCTTTAACCT CAATGGGTTT 
AATTTTAACC AATCGGTTTT AGATTCCCAA GGCCGGGTGA TTGCTACCTG GGCTGATGTA 
CTCAACCGCG CAGGAATTGG CATGGAAGTG ATGCACGAAC GCAATGCTCA CAATTTCCCC 
TTAGACTTAG CGAGTGGAGA ACAAACCCTA TTAGCCATTA AATAG
 
Protein sequence
MTTTIQTREN LSLWERFCQW VTSTNNRLYV GWFGVILIPT ILTATICFII AFIAAPPVDI 
DGIREPVAGS LLYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PYQLVVFHFL 
IGIFCWMGRQ WELSYRLGMR PWICVAYSAP VSAATAVFLI YPIGQGSFSD GMPLGISGTF 
NFMFVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTET ESQNYGYKFG 
QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLGAWPV IGIWFTAMGV STMAFNLNGF 
NFNQSVLDSQ GRVIATWADV LNRAGIGMEV MHERNAHNFP LDLASGEQTL LAIK