Gene PCC8801_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3161 
Symbol 
ID7103902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp3307942 
End bp3308835 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content41% 
IMG OID643476185 
ProductTPR repeat-containing protein 
Protein accessionYP_002373296 
Protein GI218247925 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAA CCGTTAAAGA TAATACCGTG CTTAAATATA ATTGGTTGCT TTCTCTCCTT 
GCTTGTACAG GGTTATGGTC TATTACCCTC CCCGTTTTAG GACAAGCCCT TTTACCCTAC
ACTCCCCAAC TAAATAACGA ACAATTGGAA CAACAGGGCT TAGAATTGGC TGATGATGCT
GTTCAACTGG TTCGCTTTCA ACAGTACGAG TTAGCTTTAT CCCGGGCTAA ACTAGCTACG
CAACTTGCCC CTAATCAATT TCAATCCTGG TTTATTTTGG GAACCTTGTA TATTCAACAG
AAAGAGCTAG ATAAAGGGGT TGAAGCCCTG CAAAAAGCCC TATCTTTAGC TCCCTCGGAA
GCAGGAATTA AATTTACCCT CGGTAACGCC TATTTTCAAC AAGGAAAGTA TCAAGAAGCG
GCAACAGAAT TACAAGACGG GCTCAAAATT AAACCCGATA CCCCGGCCGC TTTGTTTGAT
TTGGGTAATT CCTATTTAAA ATTAAACAAA ATGTCCGACG CGATCGCCTC TTATCAAAAA
GCGATCGCCC TGGAAAAAAA TTTCTGGCCA GCTATCAATA ATATTGGGTT AATTAAATAC
GAACAAGGGG ATATCAATGG TGCGGTTAAA GACTGGCAAA CAGCCTTAGA AATTGACCCC
GAACAAGCAG AACCTCAATT AGCCGTAGCT GTCGGCCTGT ACATCCAAGG CAAAACAGAA
CAAGGACTTA AATTAGGAGA GGCTGCTCTA AAATTAGATA GTCGCTATGC AGAACTCAAA
TTCCTAGAAG AAAACCTCTG GGGACCTAAG TTACTACAAG ATACCCAAAA GTTTTTAGCT
ACCCCACAAA TGAAAGCGAT TCTTGATACT CTCCAACAAG AATCTTCTTC CTAA
 
Protein sequence
MLKTVKDNTV LKYNWLLSLL ACTGLWSITL PVLGQALLPY TPQLNNEQLE QQGLELADDA 
VQLVRFQQYE LALSRAKLAT QLAPNQFQSW FILGTLYIQQ KELDKGVEAL QKALSLAPSE
AGIKFTLGNA YFQQGKYQEA ATELQDGLKI KPDTPAALFD LGNSYLKLNK MSDAIASYQK
AIALEKNFWP AINNIGLIKY EQGDINGAVK DWQTALEIDP EQAEPQLAVA VGLYIQGKTE
QGLKLGEAAL KLDSRYAELK FLEENLWGPK LLQDTQKFLA TPQMKAILDT LQQESSS