Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_3061 |
Symbol | |
ID | 7105986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 3202402 |
End bp | 3203358 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643476085 |
Product | RNA polymerase sigma factor SigD |
Protein accession | YP_002373198 |
Protein GI | 218247827 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTTT CTAAAAGTTC TCCCGATCCT GTCCGCGCTT ATTTACGAGA AATAGGTCGT GTTCCTCTAC TAACCCACGA AGAAGAAATC CTCTATGCTA AACGAGTACA GCGATTTGTA GCCTTAGAAA CCCTCAAAGA ATCCTTAACC GAAGAATTGG GACAGGAACC TACCATAGCA CAATGGGCTA AAGCCGCTAA AATGACTCAA AAAGAACTCC GATCTGCCAT TGAAGCGGGA GAAGCTGCTA AGCGGAAAAT GGTGGAAGCC AATTTACGTC TGGTAGTCTC CGTCGCTAAA AAGTATCTGA AGCGGAACCT AGATTTACTC GACTTAATCC AAGAGGGAAC CATTGGGATG CAGCGAGGGG TAGAAAAGTT TGATCCCACC AAAGGCTATC GCTTTTCGAC CTATGCTTAC TGGTGGATTC GTCAAGCCAT TACCCGTGCG ATCGCAGAAA AAAGCCGAAC CATTCGCTTA CCGATCCATA TTACCGAAAA ACTTAATAAA ATCAAGAAAG CCCAGCGACA ACTTTCCCAA GAAAAAGGAC GCGCTGCTAC CATTGCCGAA TTAGCTGAAG AACTGGAATT AACCCCTAGA CAAGTACGGG AGTACCTAGA ACGAGCCCGT CAACCCTTGT CTCTTGACTT ACGGGTAGGA GATAACCAAG ACACCGAATT AGGGGACTTA TTAGAAGATA CCGGCCAGTC TCCTGAAGAT TATGCCACTC ATTCTTCTTT GCAGTTGGAC TTAGATAGAC TGATGGAAGA GTTGACCCCG CAGCAGAAGG AAGTGTTAGC CTTAAGATTT GGGTTATCCG ATGGTAAACC CCTAACTTTA GCTAAAATTG GCAGTATCTT GAATATTAGC CGCGAAAGGG TTAGGCAAAT CGAACGGGAA GCATTAGCAA AATTGCGAAA ACGAAAGGCC AATATTCGGG AATATTTGGC GAGTTAA
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Protein sequence | MNVSKSSPDP VRAYLREIGR VPLLTHEEEI LYAKRVQRFV ALETLKESLT EELGQEPTIA QWAKAAKMTQ KELRSAIEAG EAAKRKMVEA NLRLVVSVAK KYLKRNLDLL DLIQEGTIGM QRGVEKFDPT KGYRFSTYAY WWIRQAITRA IAEKSRTIRL PIHITEKLNK IKKAQRQLSQ EKGRAATIAE LAEELELTPR QVREYLERAR QPLSLDLRVG DNQDTELGDL LEDTGQSPED YATHSSLQLD LDRLMEELTP QQKEVLALRF GLSDGKPLTL AKIGSILNIS RERVRQIERE ALAKLRKRKA NIREYLAS
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