Gene PCC8801_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3005 
Symbol 
ID7104497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp3114583 
End bp3115677 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID643476035 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002373148 
Protein GI218247777 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTA AAATAGCTCC TCAGAACAAC ACAGAAGAAA GTTTACTCAG CAGTGCACAA 
ACCTATTTTA TCCAACAAGT TGCCCCCCAA GCAGCCTTGC TCGATCAAGA CACAGAAGCC 
CTCAAACAAA GCTTCAAAAA AATGGGCGAT CACGGGTTAT TAGGCTTAAA TATTCCTCAA 
CAATGGGGCG GCAAAGGAGC TTCAGAATTG ACCTATCGTC GCTTTCAAAT CCTCATAGCG 
CGGTATTCAG GAGCTCTCGC CTTCTTACAA ACCCAACACC AAGGAGCGAT CGCTAAACTC 
ATTGTCAGTC CCAATACCCC CCTCAAACAA ACCTACTTAC CCTTGATGGC CACCGGAGAA 
ATGCTCGTTG GGGTAGGCTT TTCCCAATTA CGCCGTCAGG GGAAACCCCT CATGCAAGCA 
ACCCCCGTTA CAGGAGGCTA TCTGTTAACT GGAGAAGTCC CCTGGATCAC GGGATGGAAT 
ATCTTTGAAG AATTTATCAT CGGGGCGACG TTACCCACCT CAGAAGCCTT ATATGGAATC 
ATTCCCTTCC GAGAAGAACC CGGATTACAC TTTAGTCAAC CCATGGAATT AGCGGTAATG 
GGTGTCACTA ATACGGTAAA GGCTACCCTC ACCGACTGGT TTTTACCCTG TGATCGCCTT 
GTCTCGCTTC ATCCACCCGG AACGGTGCAA GAAAGCGATC GCAAAAATGT CCTCCATCAT 
GGGTTTTTTG CCCTAGGATG TGCCCAAGCG GGCTTAGATA TTCTCGAACA AGCTTGTCAG 
CAAAAATCCC TACCTTTCTT GCAACCTGCC TTAGATTCTC TGCATAATGA ATTGATGCAA 
TGTACCCAAG GGATGTTAGC CTCCTTGTCT CCTGATCGGG TTCTCTACGA AAAGCGGTTA 
CAGTTACGCG GGTGGGCAAT TAATTTAGCG AGTCGATGTA GTCAAGGGGC GGTGATCGCA 
TCAAGTGGGG GAGCCAATTT TCTCTCTCAT CCAGCCCAGC GTGTCTATCG AGAGGCATTA 
GTGTTTACGG TACTCGGACA AACCAGCGAA GTGATGGAGG AGACGTTGAA ACAATTGGTA 
TCTGAAGAGT TTTAA
 
Protein sequence
MQTKIAPQNN TEESLLSSAQ TYFIQQVAPQ AALLDQDTEA LKQSFKKMGD HGLLGLNIPQ 
QWGGKGASEL TYRRFQILIA RYSGALAFLQ TQHQGAIAKL IVSPNTPLKQ TYLPLMATGE 
MLVGVGFSQL RRQGKPLMQA TPVTGGYLLT GEVPWITGWN IFEEFIIGAT LPTSEALYGI 
IPFREEPGLH FSQPMELAVM GVTNTVKATL TDWFLPCDRL VSLHPPGTVQ ESDRKNVLHH 
GFFALGCAQA GLDILEQACQ QKSLPFLQPA LDSLHNELMQ CTQGMLASLS PDRVLYEKRL 
QLRGWAINLA SRCSQGAVIA SSGGANFLSH PAQRVYREAL VFTVLGQTSE VMEETLKQLV 
SEEF