Gene PCC8801_2998 details

Gene Information

• Locus tag: PCC8801_2998
• Symbol: hemE
• ID: 7104490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 3104861
• End bp: 3105925
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 643476027
• Product: uroporphyrinogen decarboxylase
• Protein accession: YP_002373141
• Protein GI: 218247770
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0407] Uroporphyrinogen-III decarboxylase
• TIGRFAM ID: [TIGR01464] uroporphyrinogen decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCAAG GTAATAATAC CCCCTATTTA CTCCGTGCTG CACGGGGAGA GATATTAGAC 
AGACCCCCCG TGTGGATGAT GCGACAAGCG GGGCGTTATA TGAAGGTTTA TCGAGATTTA 
CGCGACAAAT ACCCCAGTTT TCGGGATAGA TCGGAGAATG CAGACTTAGC CATCGAAATT 
TCCCTACAAC CCTGGAAAGC ATTCCGACCC GATGGGGTGA TCATGTTCTC TGATATTCTA 
ACCCCTCTCC CTGGCATTGG CATTTCCTTT GAAATTCCTG AAAGCAAGGG TCCGATGATT 
GATTCTCCTA TTCGTACCCA GGAACAGGTC GATAATCTCC ATTCTCTCGA CCCTGAAGCG 
TCTTTACCCT TCATAAAGAC TATTTTAAAG GCTTTACGCG ACGAAGTGAA GAACGAAGCT 
ACGGTTTTAG GGTTTGTCGG TTCTCCTTGG ACTCTTGCAG CTTATGCTAT TGAGGGGAAA 
AGTTCCAAAG ATTATGCCAA CATTAAACGG ATGGCTTTCT CTGAACCAGC CATTTTACAC 
CAGTTTTTGA GTAAATTAGC CGATGCGATC GCGGTTTATG TTCGCTATCA GATCGATTGT 
GGTGCTCAAG TAGTGCAATT GTTCGACTCT TGGGCGGGTC AATTGAGTCC CCAAGATTAC 
AAAGTGTTTG CACTTCCCTA CCAGCAACAG GTCGTCCGTC AGGTGAAAGC AACCCATCCT 
GATACCCCGC TTATTCTCTA TATTAGCGGC AGTGCCGGGG TTTTGGAACT GATGGGTCAG 
TCGGGGGTAG ACATCGTTAG CGTTGACTGG ACGGTGGATA TGGCTGACGC TAGACAACGG 
TTAGGACGTA ATATGATGGT ACAGGGGAAT ATCGATCCAG GTATCTTATT TGGGTCAAAA 
CAGGTAATCC GCGATCGCAT TTTAGACACA GTTCAAAAAG CGGGTAAAGG TGGCCATATC 
TTGAATTTAG GTCATGGTGT CTTGGTGGGA ACTCCTGAAG AGAATGTTGG TTACTTCTTT 
GAAACGGCTA AGCAGGTTGA TCAATTACTC GCGGTTCCCG TTTAG 

 

Protein sequence

MTQGNNTPYL LRAARGEILD RPPVWMMRQA GRYMKVYRDL RDKYPSFRDR SENADLAIEI 
SLQPWKAFRP DGVIMFSDIL TPLPGIGISF EIPESKGPMI DSPIRTQEQV DNLHSLDPEA 
SLPFIKTILK ALRDEVKNEA TVLGFVGSPW TLAAYAIEGK SSKDYANIKR MAFSEPAILH 
QFLSKLADAI AVYVRYQIDC GAQVVQLFDS WAGQLSPQDY KVFALPYQQQ VVRQVKATHP 
DTPLILYISG SAGVLELMGQ SGVDIVSVDW TVDMADARQR LGRNMMVQGN IDPGILFGSK 
QVIRDRILDT VQKAGKGGHI LNLGHGVLVG TPEENVGYFF ETAKQVDQLL AVPV