Gene PCC8801_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2624 
Symbol 
ID7103613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2711521 
End bp2713755 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content43% 
IMG OID643475665 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_002372784 
Protein GI218247413 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG3447] Predicted integral membrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCAG TCCGAACTCT GTGGCACTCC AATTTAAGCA AACTCACTCT AGTGGCGATC 
GCGTACTGGA GTGGAGGATG GCTAGGACGA CAATCAATGG AACTAACCCA AGGCACTTGT
CCCCTGTGGC TACCGGCTGG AATTGCCCTA ACAGCCCTAT TACTCTATGG TGAGCAACTC
TGGTTAGGCA TCTTTCTCGG AGATCTTCTT TTAACCTTGA CTTTGGGAGG AAGTTGGGGA
TTAGCCATTG GTTCAGCTAT GGCAACTACC CTATCTGCTG TGATTGGGGT TAAATTACTC
CATTGGTGGA GATTTTCGCC TAAACTCTCA AAAATACGCG ATGTAACCGC TTTACTCCTG
TTGGCTGCTA TTTTTGCCCC AATTGTCCAT GCGTCTCTAG AAACCCTAGT CCGTCTCATC
CTAGGGAGTC TAGAGGGAAA AACCTGGGGA CAGCATTGGT GGTTACAGTG GTTAGGGGAT
TCTAGCTCAA TTATGGTCAT TGCGCCCTTT TTGCTGCGTC TCAAGTCAGA TAGGGATACC
CTATTACGAC GGCAACCCAA AAAGCGTCTT CTTGAAGGAG CTATTTGTGG GGGACTGCTG
TTAGGGTTGA GTTGGATGGT ATTTATCCGT CATGGCATCT CTGGGACTGT CTCATCAGAG
GATTTTACCA ATACCCAATA TTTAGAGTAT TTACCCTTTC CGATTGTGGT TTGGGCAGCC
ATTCGCTTTC AAACCTGGGG GGCAGTTTTA GGGAGTCTGT TTGTCTCCAT TGGGGCGATC
GCAGGAACTC TTCAAGGCAC TGGCCCCTTT ATCCTGCAAA CGACGAATCT GGCACAAGCG
ACGCTCTTAT TACAAATTTT TCTGATTATT ATTAGTACAA CCGCTTTACT GTTATCGGCT
GCCGTAACGG AACGACAACG GGTAGAAAAG CAACTATTGG ATACTTTAGA ACGAGATCAT
CTGTTAGCAG AAGTAGCCTT ACGGATTCGG CACTCTTTGG ACTTAGAACA GATTTTTCAA
ACTACTGTGG CGGAAATTCG TACGTTGATT GATAGCGATC GCGTGTTTAT TGGAACATTA
CAGGACAATG GACGCATTGA AGTGGTAGCG GAGTCGGTAG CGCAGGGTTA TCCGAGTTTG
TTGGGAGGTA GTGCCAGGGA CGATTTATTA GCGAATTTAC CCTCATTATT TAGCCAAGGA
CAGACCTTTG TTGCCTCTGA TATTAGCCAT CTGCATTTAT CCCCTACAGT GGTTCAATAT
AGCCAACGTT ATCAGATTAA AGCTGCGTTA GTAGTTCCGC TTCATCTGGA TCATCAACCC
TTGGGGTTAT TAGTCGCGCA TCACTGTTCT GGGATGCGTC ATTGGCACAA ACAGGAAGTT
AAACTCTTAG AACAGTTAGC TGGTCAAGTG ATGATTGCCA TGGGCCAAGC CCAATTATAT
CAAAAAGTGC AACAACTCAA TAGTAATTTA GAAAAACAAG TCGCAGAAAG AACTCATCAA
TTGCAAGAAA AAATTGAAGA AGTGCAAGAC TTATATGACA TGAAAGCGGT TTTTTTACAA
GCTGTTTCCC ATGATTTGCG CACCTCAATT ATGGGGTTAT TGATGTTATT AAAAAACTTG
GAAAATCGCC CTGGAGAGAG TATTAGTGTT TCTCGATCTA TTTTAGACCG CATGATTAAA
AGTAGTGATC GCCAATTAAC GTTAATTAAT GCGTTATCGA AAGATCATTT TTCTGAAGAA
CGACCTTTAA TTATTAATTG CAAAACGCTT GTTTTAAAGG ATGTAATTAC TAAAATTGCT
CAAAACTGGG AACCGCTATT AATTCAAAAT CAAGCAACGT TTACCCTCCA TATTCCTGAT
AATTTGCCCT TGATTTTTGC CGATCCTGAA CAATTAATCC AAGTATTTGA ACAGCTATTA
AGTAATGCTT TTAAACACAA TCCTCCGGGG ATTGATTTAG TCTTTAAAGC CACTTTTCAA
GGAGGAATGG TTCACTGTCA TTTAGCCGAT AATGGTGTAG GAATGGAACC CCAACAATGC
GATCAACTCT TTAAATTATA CCTGCGAAGT TTGCATGATA GACGCAGAAC AGGAATTGGG
TTAGGGTGTT ACCAATGTCG CCAAATTATC GAGGCTCATG GGGGAACCAT TGGAGTGAAT
AGTAATCCTG GCAAAGGTTC TGAGGTTTGG TTTACTTTAC CCATCGCCAA AAGCCAACCA
TCCGCCGTGA GTTAG
 
Protein sequence
MTPVRTLWHS NLSKLTLVAI AYWSGGWLGR QSMELTQGTC PLWLPAGIAL TALLLYGEQL 
WLGIFLGDLL LTLTLGGSWG LAIGSAMATT LSAVIGVKLL HWWRFSPKLS KIRDVTALLL
LAAIFAPIVH ASLETLVRLI LGSLEGKTWG QHWWLQWLGD SSSIMVIAPF LLRLKSDRDT
LLRRQPKKRL LEGAICGGLL LGLSWMVFIR HGISGTVSSE DFTNTQYLEY LPFPIVVWAA
IRFQTWGAVL GSLFVSIGAI AGTLQGTGPF ILQTTNLAQA TLLLQIFLII ISTTALLLSA
AVTERQRVEK QLLDTLERDH LLAEVALRIR HSLDLEQIFQ TTVAEIRTLI DSDRVFIGTL
QDNGRIEVVA ESVAQGYPSL LGGSARDDLL ANLPSLFSQG QTFVASDISH LHLSPTVVQY
SQRYQIKAAL VVPLHLDHQP LGLLVAHHCS GMRHWHKQEV KLLEQLAGQV MIAMGQAQLY
QKVQQLNSNL EKQVAERTHQ LQEKIEEVQD LYDMKAVFLQ AVSHDLRTSI MGLLMLLKNL
ENRPGESISV SRSILDRMIK SSDRQLTLIN ALSKDHFSEE RPLIINCKTL VLKDVITKIA
QNWEPLLIQN QATFTLHIPD NLPLIFADPE QLIQVFEQLL SNAFKHNPPG IDLVFKATFQ
GGMVHCHLAD NGVGMEPQQC DQLFKLYLRS LHDRRRTGIG LGCYQCRQII EAHGGTIGVN
SNPGKGSEVW FTLPIAKSQP SAVS