Gene PCC8801_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2530 
Symbol 
ID7101709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2623639 
End bp2624421 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content41% 
IMG OID643475572 
ProductTPR repeat-containing protein 
Protein accessionYP_002372694 
Protein GI218247323 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA TAATTTATCT GTTAGGAGTT TTAAGTAGTC TTTTGATGGT TAATTCTGTG 
GTATTAGCTC AGCAATCTAC CAATAATTCT CCCTCAAATG CCGTGGGATG GTACAATCAA
GGGGTTGATA AAATTGGTGC AGGAAATTAT CAAGGGGCGA TCGCAGATTT TACCCAAGCC
ATACAACTCG CGCCTCAAGA TCCAGATTCC TACTACAATC GAGGCTATGC TTACCATATC
ATAGGGAAGA TCGATCAGGC TCTGGCTGAT TATAACCTAG CCATTCAATT GAATCCCCAA
TTTGCCTATG CCTACGGCAA TCGCTGTTAT GCTTTCTATC AAATGAAAGA CTATCAAAAG
GCTTTGTCTG ATTGTTCCGA GGCCATTAAA CTTAATCCTA ATTATGCCGA TTTTTATATC
TATCGGGGTA ATGCTCAAGA TGATCTAGGG AATCATCAAG CGGCGATCGC AGACTATACT
GAAGCCATTC GTCTTAATAG CAACTATGCT AAAGCCTATT ATAACCGAGC CTTGGCTTAC
AATCGTGCCC AACTTTTGCC AGAAGCGATC GCAGATTACA CGAAATCTGT TCAATTAGAC
CCGAATTTTG CTGATGCTTA CTACAATCGA GGGATAACTC AGTTTAAACT AGGCAATGAA
TCAGAAGCGA TCGCCGATCT CCAAAAAGCC TCTCAACTCT TTAAAACTCA AGGTAACACA
ACCTATAGTC AAAAAGCCAA CGATACCCTC CAAAAACTGC AAATGGATAT GGATTCCCGT
TAA
 
Protein sequence
MNKIIYLLGV LSSLLMVNSV VLAQQSTNNS PSNAVGWYNQ GVDKIGAGNY QGAIADFTQA 
IQLAPQDPDS YYNRGYAYHI IGKIDQALAD YNLAIQLNPQ FAYAYGNRCY AFYQMKDYQK
ALSDCSEAIK LNPNYADFYI YRGNAQDDLG NHQAAIADYT EAIRLNSNYA KAYYNRALAY
NRAQLLPEAI ADYTKSVQLD PNFADAYYNR GITQFKLGNE SEAIADLQKA SQLFKTQGNT
TYSQKANDTL QKLQMDMDSR