Gene PCC8801_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2440 
Symbol 
ID7101583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2519483 
End bp2521975 
Gene Length2493 bp 
Protein Length830 aa 
Translation table11 
GC content35% 
IMG OID643475484 
Productpentapeptide repeat protein 
Protein accessionYP_002372607 
Protein GI218247236 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins
[COG3972] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCTT CTAATTTTAT TGTTACTGAA CTGTTTCATC AAAGTGGAGA AGCAGGAGAA 
AGGGTTGTTT GGGAAGCGAT ACAAAGGGTA TTTTATGGGC GAGAATGTCT GGCTTATTGG
CGTTATCCTC TGTTTTTAGG AAAGGGAAAA TTTCGCAAAG AACCTGATAT TTTAATCGCC
GATAGGGAAC TGGGTTTAAT TATTATTGAA GTTAAGTCTA TTAAAATTAA TCAGATTATT
AGTATTCAAG GACATCGTTG GCAATATAAA AATTTTTATA CTAAATTTGG CAATCCCTAT
CAACAAGCAG AAAATCAGTT ATTTGCTTTG TTAGATTATG CTAAAACCGA ACCAAGTTTA
GATAATCAAG TAACAGGTAG GGTAATGGTT GCTTTACCTT TAATTACTCA ACAACAATGG
CAAGAAAAAG AGTTTGATAA ACTTCCTAGT AATCCTCCAA TTTTATTTAA AAATTCTCTA
GACTCATCGG CTTTATTGTT TGAATTGATT GAAAAAACAA CGCCTGTTCT TAAAAGAGAA
AAATTGAGCA ATCAACAATG GGAATTACTC ACTTCTATTC TATCAGGAAC ACCTGTTTTA
AGTCAACCCA TTCATCGGGT ATTGAGTGGT TCTCAAAGTC GTGGCAAGGT TTTACAAGAA
TTGCGATCGC AGGTAAGTCA ATTGGATTTA CAACAGGAAA AAATTGCCAA ACAAATACCA
CCAGGGTGTC AAAGAATTAG GGGAATAGCG GGGTCAGGAA AAACGGTTTT ACTGTGTCAA
AAAGTGGCAA TTATGCACCT TAAATATCCG CAGTGGAAAA TTGCCTTTGT CTTTTTTTCG
CGTAGTCTTT ATGAGGAAAT TACCACCCAC ATTGATCGCT GGATTCGCTA TTTTAGTCAT
AATCAACAAG GCTATGATCC CAATAATCGT AACTTACGGG TTTTTCATGC TTGGGGTTCA
GAGAAAAAGT TGGGGTTTTA TCGATTTGTT TCTCAAGTCT GTGGAAAAAC GCCTTTAAGT
GTTAATCAAA CAACTCGACA AAAACCTAAT GAAGCATTAG GAGAAGTTTG TTATGATTTA
TTGAATAAAA CAGGCATTCC TCAGATTTTT GATGCTATTT TGATTGATGA AGGACAAGAC
TTAATGGTTG ATCATTGGCA CTATCAAGGT AAACAACCTT TTTATTGGTT AGCCTATCAA
TCTTTACGTC CAGTTAATTC TATCTATCCT GAACAAAAAC GGTTAATTTG GGCTTATGAT
GAAGTCCAAA GTTTAGACAG TTTAAAAATG CCAACAGCTA GGGAAATGTT TGGAGAAGAA
TTAGGTCATT TAGTCACCGG AAAGCATTTT AATGGGATTA ATAAAACTGA GGTAATGTGC
CGTTGTTATC GAACGCCTCA TCCGATTATT ATTGCTGCTC ACGCGATGGT AATGGGATGG
TTACGTCCTG AAGGAATGTT AACGGGAATG AGGCATAAAG AAGAATGGCA AGCATTAGGC
TATGAAGTTA CGGGAGAGTT GATTTCAGGC AATAATATTA TTATCAAAAG ACCGAAAGAA
AATTCTCCTA ACCCTTTGCC TTATTTATGG AAAGATGATT TAATTAAGTT TGAGATTTAT
TCATCAAGAC AACAGGAAAT GAGTGCTTTA TATCGCCATC TTAAACACAA TTTACGCCAG
GATGGTTTAC GTCCGAGTAA AGAGATTTTA GTGATTGTTT TAGGAGAATT TTTTGAGGCA
GCAAATTTAC AAAAAAATAT TGCTAATTTT TTAATCAGAC AAGGAATTGA TATTTTTATT
CCTGGGACAA AAGATTGTAA TATTCTAACT CATGAAAGTG AGGAAAATTG TGATCAATTT
TGGTGTGCTG GTGGGGTAAC AATTTCGCGT ATTTATCAAG CGAAGGGACA GGAAGCTGAT
CAAGTTTATA TTATTGGATT AGATCACATT GCGGAAGAGG AAAGTAATTT ATCGTTACGC
AATCAATTAT TTATTGCTTT GACGCGATCG CGGGGGTGGG TTAATATTAG TGGTATTGGC
AATTACCCTC TTTATCAAGA ATTACAAAAT GTCTTAAACA ATGGCGATAC TTTTTCCGTT
ACGTTTGCTG AACCTCAACA ACGAGAAATT ATCGGAACCG ATGAAGGAGA ATTATTAAAA
AGCTATAGTT TAGGGAGAAG AAATTTTGAA CAAGCAGCGT TACAAAATGC ACAATTAAAT
AGAGTTAATT TAAGCGATAT TAATCTCATT GGAGCAAATT TATCGGGAGC AAGATTTAAC
TATACTAATC TTAATCGTGC TAAATTAATA GCAGCGAATT TACAAGGGGC TGATTTAACA
GGAGCCAGTT TAATTAAAGC TAAATTGATG GGGGCTAATT TAAAAGGAGC AAATTTACAA
GAGGCTGATT TAACACAAGC AGATTTAAGT AATGTAGACT TAACAGGGGC ATTAGTCGAA
CCAGAACAAT TAGAAAAGGC TATTTTTGAA TAA
 
Protein sequence
MIASNFIVTE LFHQSGEAGE RVVWEAIQRV FYGRECLAYW RYPLFLGKGK FRKEPDILIA 
DRELGLIIIE VKSIKINQII SIQGHRWQYK NFYTKFGNPY QQAENQLFAL LDYAKTEPSL
DNQVTGRVMV ALPLITQQQW QEKEFDKLPS NPPILFKNSL DSSALLFELI EKTTPVLKRE
KLSNQQWELL TSILSGTPVL SQPIHRVLSG SQSRGKVLQE LRSQVSQLDL QQEKIAKQIP
PGCQRIRGIA GSGKTVLLCQ KVAIMHLKYP QWKIAFVFFS RSLYEEITTH IDRWIRYFSH
NQQGYDPNNR NLRVFHAWGS EKKLGFYRFV SQVCGKTPLS VNQTTRQKPN EALGEVCYDL
LNKTGIPQIF DAILIDEGQD LMVDHWHYQG KQPFYWLAYQ SLRPVNSIYP EQKRLIWAYD
EVQSLDSLKM PTAREMFGEE LGHLVTGKHF NGINKTEVMC RCYRTPHPII IAAHAMVMGW
LRPEGMLTGM RHKEEWQALG YEVTGELISG NNIIIKRPKE NSPNPLPYLW KDDLIKFEIY
SSRQQEMSAL YRHLKHNLRQ DGLRPSKEIL VIVLGEFFEA ANLQKNIANF LIRQGIDIFI
PGTKDCNILT HESEENCDQF WCAGGVTISR IYQAKGQEAD QVYIIGLDHI AEEESNLSLR
NQLFIALTRS RGWVNISGIG NYPLYQELQN VLNNGDTFSV TFAEPQQREI IGTDEGELLK
SYSLGRRNFE QAALQNAQLN RVNLSDINLI GANLSGARFN YTNLNRAKLI AANLQGADLT
GASLIKAKLM GANLKGANLQ EADLTQADLS NVDLTGALVE PEQLEKAIFE