Gene PCC8801_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1936 
Symbol 
ID7102884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2013632 
End bp2014372 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content46% 
IMG OID643474997 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002372130 
Protein GI218246759 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCGAA TACTTGTAAT TGATGATGAT GCTGCCATTT CAGAATTGGT CAGCGTCAAC 
CTAGAAATGG CTGGTTATGA TGTGAATCAA GCTGGAGACG GGATTAAAGG GCAAGCCTTA
GCCGTCCAAT TGCAGCCTGA TTTAATCATG CTAGACCTCA TGTTGCCCAA AGTAGACGGA
TTTACCGTTT GTCAGCGACT GCGCCGAGAT GAACGGACGG CCGATATTCC CGTTCTGATG
TTAACCGCTT TGGGAGAAAC CAAAGATAAA GTCGAAGGCT TTAACGCAGG GGCCGATGAT
TATCTGACCA AACCTTTTGA AGTCGAAGAG ATGTTAGCTA GGGTTCGGGC GTTACTGCGG
CGGACTGATC GGATTCCCCA AGCAGCGAAA CATTCAGAAA TCCTCAACTA TGGTCCTTTG
ACCCTGATTC CAGAGCGATT TGAAGCGATT TGGTTCCAAA AAACGGTTAA ATTAACCCAT
CTAGAATTTG AATTGCTTCA TTGTTTGCTG CAACGTCACG GACAAACGGT CTCTCCTAGC
GAAATTCTCA AAGAAGTGTG GGGATACGAT CCCGATGACG ATATTGAAAC GATTCGGGTA
CATATTCGCC ATTTACGGAC GAAATTAGAA CCCGATCCCA GACATCCCTG TTATATTAAA
ACCGTTTATG GTGCAGGGTA CTGTTTAGAG TTACCAACAG CCGAACAACT GATGGCTGAA
GCCAATGCAG CAGTCGTTTA A
 
Protein sequence
MPRILVIDDD AAISELVSVN LEMAGYDVNQ AGDGIKGQAL AVQLQPDLIM LDLMLPKVDG 
FTVCQRLRRD ERTADIPVLM LTALGETKDK VEGFNAGADD YLTKPFEVEE MLARVRALLR
RTDRIPQAAK HSEILNYGPL TLIPERFEAI WFQKTVKLTH LEFELLHCLL QRHGQTVSPS
EILKEVWGYD PDDDIETIRV HIRHLRTKLE PDPRHPCYIK TVYGAGYCLE LPTAEQLMAE
ANAAVV