Gene PCC8801_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1342 
Symbol 
ID7103043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1394845 
End bp1397319 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content50% 
IMG OID643474423 
Productpenicillin-binding protein, 1A family 
Protein accessionYP_002371560 
Protein GI218246189 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAATC AATTCGGGTC AAAATTTCGG CAAAAAATTA GTCAATTCTT CCCCCAAAAA 
CCCGACAAGG AGGGAGAAAA TTCTCAACCT GTCAAGAATA CCCCCCAACC AATCACATAT
CTAGCCTCAG ATTATTGCAA AAAATTTAAG CAAAAGCTAC AGTTACCCCC CTCAGTCATC
GCTTTCTCCC AAACGGCTGT CAATTCCCTT AAACGAGCTT CATTAGTCCG TCATCATCCC
AAATTTTGGC TATTATTTGG GATTACCATG GGAACCAGTA GTAGTGCGAT CGCCCTTGGA
TACACCATCT ATCAAGTGGA AAGCAGCATC ACTGAATCGG TCGAAGAAGT CTTCACCTAT
GCCCGTCCCG AAACCTTGAG CATCAAAAGT GCTGACGGCG AAATTCTCGA AGAAGTCGGA
CCCGTTACCC ACGAAAAGCT GAAAATTTGG CAAATTCCCG ACACCATTAT TGAAGCCTTC
ATCGCCAGCG AAGATCATCG CTTCGAGAGT CATCAGGGAG TTGATCCCCA AGGCATTTTT
CGAGCAATGT TTTCCAACCT CAAAGCCGGA GAAGTGGTCG AAGGCGGTAG TACCATCACC
CAACAGTTAG CCCGCATCGT CTTTCTCAAT CAAGAACGCA GCATCACCCG TAAATTGAAA
GAAATGCGCC TAGCTCAAAA AATTGAAGCC AATTTAAGCA AAAATCAGAT TTTAGAGCAA
TATTTAAACC TAGTTTATCT CGGATCAGGA GCCTATGGAG TCGCCGACGC AGCGTGGGTC
TATTTTGGGA AAACCGCCGA TAAACTGACT ATTCCTGAAG CAGCTACCCT AGCGGGTATT
GTACCTGCCC CTAGTCTCTA TTCTCCCTTA GAAAACCTTA ACGCTGCAAC AGAACGGCGG
AATATCGTCC TGCAACGGAT GATCGATCAG AAATTGATTA CCCCCGAAGA AGGAAAAACC
GCGATCGCAT CCTCCATCGC CCTAAAACCC CAAAAACCCA AGCGTTTAGA GCGAAAAGCC
CCCTATTTTA CCGATTATGT CCAAGCAGAA CTGCCCAAAT ATGTCCCCCC AGAGATTTTG
AAACAGGGGG GAATTACCGT CGAAACCACC CTGAACAGTC AATGGCAAGT CGCAGCCGAA
AAAGCCATTG AAACCGCCGT TACCCGTTAT GGACGCTGGC AAGGCTTCAA ACAAGCCGCG
TTAACCGCCG TTGATCCCCG TAATGGACAA ATTAAGGTGA TGGTGGGGGG CAATGACTAC
GAAAATTACC AATATAACCG CGTCACCCAA GCCAAACGGC AACCCGGCTC AACCTTTAAG
CCTTTTGTCT ATGCAACGGC GATCGCGGCC GGATTTTCCC CCTATCGCAG TTTTAATGAC
TCCCCCTACG TCATCGATGG CTATCGTCCT GAAAACTATG GGGATAAGTA CAGTGGCGTT
CCCGTGTCCA TCCGTCAAGC CTTAGCCTCT TCCCTAAACG TCGTGGCGGT ACAAGTCTTG
GTGAAAGTAG GCTGGAACCC CATTATTAAA GTGGCTCAGG CGATGGGCAT TCAATCTGAG
TTAAAACCCA CCTATTCCCT GGCCTTAGGG GCATGGGAAG TCAATTTACT CGAATTAACC
AACGCTTACG GAACCTTTGC CAATAACGGC ATCCATCAAC CCGCCTACGG CATCAGTCGG
GTGCGCGATC GCCAAGGTAA CGTCCTCTAT CAAGCTAAGT TTAGCCCCAA AGAAGCCCTT
GACCCCGATA GTACCGCGAT TATGACCTGG ATGATGCGAG GGGTGGTGAC ATCAGGCACA
GGAACCCCGG CTCAATTGAG CGATCGCCCC GTCGCCGGAA AAACCGGAAC TTCTGATCAA
GCCAGAGATC TCTGGTTTGT TGGCTACATT CCCCAATTAA CGGCCGGCGT ATGGTTAGGC
AACGACAACA ATAAGCCTAC TTGGGGCGCA AGTAGCACGG CTGCGATGAT TTGGCGCGAG
TTCATGGTAG AAGCCGTCAA AGGGACTCCG GTTGAGTCTT TTTCCCCTGT TCCTTCTTTA
AACGGGCGTA AAGCCACCAT TAAAGCCGAA CCCATCAAGC CCAAACGCAT CCGCTATGAG
GTGGTGACTC GCTATGACTC GTCTGAACCA ACGAGGGCAA GTCAAAGTCA AGAAGAACCC
CGTTATGAGG AAAGACGCAG TTCAACCCGC CGCCGTCGCC GTCGGGATAC CTATTCTCCC
CCGACTGAAG AGACAACGAC AACAACAACC GCCCCAACTC GGCAGACACG AAGACGGAGA
GAGACAGCCC CCGTTGAGCC TCCCCCGTCT GCTGCGATCG CGCCTCAACC GGAACCCCAA
ACCCAAGCAC AACCGCAACC CCAACCGGTT GCTGCGCCCC TTCCTGCCCC TGTTTTACAG
AAAAAACCTG AACCTGCTGC TCCTGCGGCT GAATTTGTCC CTCCTGCGCC TCCTGTGGAA
AGAAAGGGAG AATAA
 
Protein sequence
MFNQFGSKFR QKISQFFPQK PDKEGENSQP VKNTPQPITY LASDYCKKFK QKLQLPPSVI 
AFSQTAVNSL KRASLVRHHP KFWLLFGITM GTSSSAIALG YTIYQVESSI TESVEEVFTY
ARPETLSIKS ADGEILEEVG PVTHEKLKIW QIPDTIIEAF IASEDHRFES HQGVDPQGIF
RAMFSNLKAG EVVEGGSTIT QQLARIVFLN QERSITRKLK EMRLAQKIEA NLSKNQILEQ
YLNLVYLGSG AYGVADAAWV YFGKTADKLT IPEAATLAGI VPAPSLYSPL ENLNAATERR
NIVLQRMIDQ KLITPEEGKT AIASSIALKP QKPKRLERKA PYFTDYVQAE LPKYVPPEIL
KQGGITVETT LNSQWQVAAE KAIETAVTRY GRWQGFKQAA LTAVDPRNGQ IKVMVGGNDY
ENYQYNRVTQ AKRQPGSTFK PFVYATAIAA GFSPYRSFND SPYVIDGYRP ENYGDKYSGV
PVSIRQALAS SLNVVAVQVL VKVGWNPIIK VAQAMGIQSE LKPTYSLALG AWEVNLLELT
NAYGTFANNG IHQPAYGISR VRDRQGNVLY QAKFSPKEAL DPDSTAIMTW MMRGVVTSGT
GTPAQLSDRP VAGKTGTSDQ ARDLWFVGYI PQLTAGVWLG NDNNKPTWGA SSTAAMIWRE
FMVEAVKGTP VESFSPVPSL NGRKATIKAE PIKPKRIRYE VVTRYDSSEP TRASQSQEEP
RYEERRSSTR RRRRRDTYSP PTEETTTTTT APTRQTRRRR ETAPVEPPPS AAIAPQPEPQ
TQAQPQPQPV AAPLPAPVLQ KKPEPAAPAA EFVPPAPPVE RKGE