| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1215 |
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| Symbol | |
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| ID | 7104910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | - |
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| Start bp | 1265796 |
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| End bp | 1267502 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643474300 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002371438 |
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| Protein GI | 218246067 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCTT TATCTACTGC ATCAATAACC CAAAATAATG AGGAAACCTA CGCTAGTTTG
TTGGTATCTA TTGAAGCAGG GATAGGAATG TTACAGATTT TTATTGCTGT CTGTGATGCT
GATATTCAAC GGGAACAACT CATTGCTAAG TATACACGAG AATTAGCTCC GAATATTCAG
ACTTATCGTG TCACTTTGAA TCCTCAAGAA CCTAGCTTAC GGTTAGCTAT TTTACAACAG
GTTTCGTTAG GAGAAAATAT CGTCGCAATG GTAACAGGAA CAGAAACATT AGGATTAGGA
AAAAATGATG ATTCTTTAGA TAAATTTTTT GGTTATTTAC AATGGACTAG GGAAGGGTTA
CGAGAATTAA AAATGCCGAT TGTTTTATGG CTTTCTTTCC GAATTTTTCG GCAATTAGCT
AAAAAAGCAC CAGATTTTTA TAGTTGGCGC AATGGGATAT TTCAGTTTGA GTCTGAACCT
TCTTTAGTTA CTAATAAACA ACCTTTTATT GAGGAGATAG AATCCATTGA AGATCAAGAG
TTAAGTTCTA TTTTTGATGT TGAACAATTA GAATCTTCTC TAGAAAAAGC CATTAATCAA
TGGGGAGAAA ATAGCAGCAA GGTGGAAACC CTTTATAGTC AATTGGGAGC ACTCTACGCT
AATCATGTTC AGTCAGGAAA AGCGACGGAT AGAGACAATG AATTAATTTT AGCAGAAGAG
TATCTGAAGA AAGCGATCGC CCTCCAAACC CAATTTAAAC GAGAAAATTC TCTTCCTGTT
TCTCTGACTA ATTTAGCAGG GTTATACTCT TTCCAAGGAA GGTATAAAGA AGCAGAACCT
CTTTATCAAC AAGTTTTGTC TATGACACAG AAACTCCTGG GAATAGAACA TCCCGATGTT
GCTACAAGTC TCAATAATTT AGCAGGGTTA TACGAGTCCC AAGGAAGGTA TGAAGCAGCA
GAACCTCTTT ATCAACAAGC TTTGTCCTTG TATCAGAAAC TCCTGGGAAG CGAACATCCG
TCTGTTGCTA CAAGTCTCAA TAATTTAGCT TATTTATACC AGTCCCAAGG AAGATATAAA
GAAGCAGAAC CTCTTTATCA ACAAGCTTTG TCCTTGTATC AGAAACTCCT GGGAAGCGAA
CATCCTGATG TGGCTACGAG TCTCAATAAT TTAGCAAGGT TATACTATTT CCAAGGAAGG
TATGAAGAAG CAGAACCTCT TTATCAACAA GCTTTGTCTA TGACACAGAA ACTTCTGGGA
AGCGAACATC CCTCTGTTGC TTCGAGTCTC AATAATTTAG CAGGGTTATA CGAGTCCCAA
GGAAGATATA AAGAAGCAGA ACCTCTTTAT CAACAAGCTT TGTCTATCAA ACAGAAACTC
CTGGGAAGCG AACATCCGTC TGTTGCTACA AGTCTCAATA ATTTAGCTTA TTTATACGAG
TCCCAAGGAA GGTATGAAGC AGCAGAACCT CTTTATCAAC AAGCTTTGTC TATGACACAG
AAACTCCTGG GAAGCGAACA TCCCTCTGTT GCTACAAGTC TCAATAATTT AGCAGGGTTA
TACTATTTCC AAGGAAGGTA TGAAGCAGCA GAACCTCTTT ATCAACAAGC TTTGTCTATC
GCAGAAAGAA CCCTAGGGGA AAACCATCCC AACACCAACA CTATCCGCAA TAACTATACA
AAACTGCGTC AACAAAATGC TCAATAA
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| Protein sequence | MNPLSTASIT QNNEETYASL LVSIEAGIGM LQIFIAVCDA DIQREQLIAK YTRELAPNIQ
TYRVTLNPQE PSLRLAILQQ VSLGENIVAM VTGTETLGLG KNDDSLDKFF GYLQWTREGL
RELKMPIVLW LSFRIFRQLA KKAPDFYSWR NGIFQFESEP SLVTNKQPFI EEIESIEDQE
LSSIFDVEQL ESSLEKAINQ WGENSSKVET LYSQLGALYA NHVQSGKATD RDNELILAEE
YLKKAIALQT QFKRENSLPV SLTNLAGLYS FQGRYKEAEP LYQQVLSMTQ KLLGIEHPDV
ATSLNNLAGL YESQGRYEAA EPLYQQALSL YQKLLGSEHP SVATSLNNLA YLYQSQGRYK
EAEPLYQQAL SLYQKLLGSE HPDVATSLNN LARLYYFQGR YEEAEPLYQQ ALSMTQKLLG
SEHPSVASSL NNLAGLYESQ GRYKEAEPLY QQALSIKQKL LGSEHPSVAT SLNNLAYLYE
SQGRYEAAEP LYQQALSMTQ KLLGSEHPSV ATSLNNLAGL YYFQGRYEAA EPLYQQALSI
AERTLGENHP NTNTIRNNYT KLRQQNAQ
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