Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0742 |
Symbol | |
ID | 7102796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 768545 |
End bp | 770236 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643473840 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002370982 |
Protein GI | 218245611 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAA AATTACAGAA ATTTTTAGCT TTGCTACTAA CTACAATAAC CTTGATGGGT ATTTTAGGGG CTTTTAGTCA TAATTTAATC GCTCAAGATA GTGCTTCAGC TACGAAATTT CCTGTTATTT TTGATGGAAA TACCCTGTTT TATGTTCAGC GTCCTAGTGG GTCACTTGCC CCAGAAGAAA GAGCAGAACT TATTCGAGAA AGGTTAGAAA AGATTGTTAA AAATCGTGAT GTTGAAATTA ACGATCAAGA TTTTGATTTA GATAATAAAG GCGATGTTGT TATTATCTTA TTTAAAAATA AAACTTTAGC AACTGTTACC ACAGAAGATG CTAAACTGGC TGATGTTTCT ACGGAAATAT TAGCTGAACA ATATTTACAA AAAATCCAAG AAGCGATTCA AAGATATCAT CTAGAACGAC AACCTTTTTA TTGGATACTA GGCATTGTTT TAACAGTGGT GACAACGATT TTGTTGATCG TTACTTTGAA GATTTTTGAT AAGATATTTC CTTATATTTA TACCTTATTA AATGATTGGC GCGATCACAT AATTCCTTCT ATTAGAATCC AGAATTTAGA ACTTTTATCC TCTGAGAATT TAACTAAAAT TTGTGAGGGA TTTGTCAGAT TAGTTCGCAT TATCTTAACT TTATTAATTC TCTATTTATT CATTCCCTTG GTTCTCAGCT TTTTTCCTCA AACAAGACGT ATAGGACATT TACTTTTTGA CTACTTAATG ACGGCTATTA ATTTAGTTGG CAATTCTTTA GTAAGTTATT TGCCGAATAT ATTTATTATT GGTGTTATTA TTTATTTAAC CTATTATACG CTGCGTTTAC TGAAGTTTAT TTTCACAGAA ATTGAAAACG AAAATCTCAA TTTTCCAGGG TTTTATCCTG AATGGGCACA ACCTACCTAT AGACTATTAA ACTGGATAAT TATTGCCCTA GCTGCTGTTT TTACTTTTCC TTATCTTCCG GGGTTTAATT CTCCTGCATT TCGCGGAGTG TCTGCGTTTC TTGCCCTATT ATTTACCTTG GGTTCAACGG GGGTTGTTTC TAATACAGTT TCCGGTTTTG TTCTGATTTA TACTCGCGCT TTTCAAGTAG GAGACATAGT GAAAATTGCT GATGCAACCG GAAAAATTCT GGAAAAAACC TTACTGGTAA CTCGTATTCA AACGGTAAAA AATGTTGTGA TTACCATTCC TAATTCGGTT GTTATTAGTA GTAATGTGGT TAATTATAGT GCTTTGTCCA GAGATACTCA CAGTCCCTTA ATTATCCATA CAACCATTAC ACTAGGTTAT GATATTCCTT GGCGTACTGT TCATGAAACT TTAATTAAAG CAGCTAAAGC AACCCCTCAT ATTTTGTCAG AACCCTCCCC CTTTGTCTGG CAAACTTCCC TCAATGATTT TCATATTAGT TATGAAATTA ATGGCTATAC TTTTGAATCT AGTAAAATGA TGGAAACCTA TTCCGATTTA CATCAAAATA TTCAAGATAA ATGTAATGAA GCAGGGATTG AAATTTTATC TCCTCAATAT TCAGCTTTGC GAGATGGAAA TCATAATACT ATACCGGAAA ACTATCTTCC TGAAGATTAT GTCAGTCCTG GTTTTAAAAT TGAACCCGTA ACCAATTTAT TAAACTTAAA TAAAGCCAAC AGGAAACACT AA
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Protein sequence | MKQKLQKFLA LLLTTITLMG ILGAFSHNLI AQDSASATKF PVIFDGNTLF YVQRPSGSLA PEERAELIRE RLEKIVKNRD VEINDQDFDL DNKGDVVIIL FKNKTLATVT TEDAKLADVS TEILAEQYLQ KIQEAIQRYH LERQPFYWIL GIVLTVVTTI LLIVTLKIFD KIFPYIYTLL NDWRDHIIPS IRIQNLELLS SENLTKICEG FVRLVRIILT LLILYLFIPL VLSFFPQTRR IGHLLFDYLM TAINLVGNSL VSYLPNIFII GVIIYLTYYT LRLLKFIFTE IENENLNFPG FYPEWAQPTY RLLNWIIIAL AAVFTFPYLP GFNSPAFRGV SAFLALLFTL GSTGVVSNTV SGFVLIYTRA FQVGDIVKIA DATGKILEKT LLVTRIQTVK NVVITIPNSV VISSNVVNYS ALSRDTHSPL IIHTTITLGY DIPWRTVHET LIKAAKATPH ILSEPSPFVW QTSLNDFHIS YEINGYTFES SKMMETYSDL HQNIQDKCNE AGIEILSPQY SALRDGNHNT IPENYLPEDY VSPGFKIEPV TNLLNLNKAN RKH
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