| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0670 |
|---|
| Symbol | |
|---|
| ID | 7105175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 696471 |
|---|
| End bp | 697238 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643473768 |
|---|
| Product | RNA polymerase sigma factor SigF |
|---|
| Protein accession | YP_002370911 |
|---|
| Protein GI | 218245540 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA AGTATAATAA CGCACAGGGG ATGGAACTGT TAATCACTTA TTCTCGTAAT
CCTTCTCTTG CCTTGCGTAA TCAACTGGTT GAACTTCATA CGGGATTAGT TCGCCAGGTT
GCCCATCGCA TTAGCAACCA ATGTACAGAA CCCTATGAAG ATTTAGAACA AATCGGCTAC
TTAGGATTGA TTAATGCGAT TGAACGTTTT AATCCCCATC AAGGTTGTGC CTTCAGTTCC
TTTGCCATTC CCTATATTCG CGGAGAAATG CTGCACTATC TGCGGGATAA AGGGAGTGTG
ATGCGGATTC CTCGTCGTTG GCAAGAACTG TATAACAAAG GCAAAAAAGT TCGCAAACAG
TTGACGACTA GCTTGGGACG AACTCCCAAG GATCAGGAAT TAGCTGATGC TTTACAGGTT
TCTTTAGAAG AATGGCATGA ATGCGAACTG GCTTTACAAA ATCGGATGTT AGTTAGTCTC
GATTCTACTA TCAATCAAAA CACCGATTCG ACCGTTAGTT TTGGCGAAAC TTTGCCTGAT
CATCGCTATC AAGCTAAGCA AAGTCAAGAG GAAGATCGAT TACAATTACA ACGGGCGATG
AGTCAGCTTG AAGACAAAAC CAAAGAAGCC ATTGAATGCG TCTTTATTAA GGAATTACCT
CGTAAAGAAG CTGCTAAACG AATTGGCATG AGTCCTATGA CAGTCACTCG TCATTTACAC
AAGGGAATTA AACAATTAAT TATCTTGTTA GAATCCCAAG TTGCTTAA
|
|---|
| Protein sequence | MKTKYNNAQG MELLITYSRN PSLALRNQLV ELHTGLVRQV AHRISNQCTE PYEDLEQIGY
LGLINAIERF NPHQGCAFSS FAIPYIRGEM LHYLRDKGSV MRIPRRWQEL YNKGKKVRKQ
LTTSLGRTPK DQELADALQV SLEEWHECEL ALQNRMLVSL DSTINQNTDS TVSFGETLPD
HRYQAKQSQE EDRLQLQRAM SQLEDKTKEA IECVFIKELP RKEAAKRIGM SPMTVTRHLH
KGIKQLIILL ESQVA
|
|---|
| |