Gene PCC8801_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0504 
Symbol 
ID7101968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp515195 
End bp516172 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content34% 
IMG OID643473608 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_002370751 
Protein GI218245380 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTC TTTACTTAAC TCAACCCGAT GCTGTTTTAA GCAAAAAACA AGAAGCATTT 
CATGTAGCAC TCAAGCAAGA AGATGGTTCT TGGAAAAAAC AATTAATCCC CGCTCAAACT 
GTTGAACAAA TTGTTTTAAT AGGGTATCCT AGTATTACTG GTGAAGCCTT ATGCTATGCC 
CTTGAATTAG GTATTCCTGT TCATTATTTA TCGTGTTTTG GTAAGTATTT AGGTTCCGCA 
CTTCCTGGTT ATTCTCGTAA TGGACAGTTA CGTTTAGCGC AATATCATGT TCATGACAAT 
GAAGAGCAAA GATTAGCCTT AGTAAAAACT GTAGTTACAG GGAAAATTCA CAATCAATAT 
CACGTTCTGT ATCGTTATCA ACAAAAAGAT AATCCTCTCA AAGAACATAA ACAATTAGTC 
AAATCAAAAA CAACACTAGA ACAAGTAAGA GGGGTTGAAG GATTAGCCGC TAAAGACTAC 
TTTAATGTCT TTAAACTAAT CTTAGATTCT CAATGGAATT TTAATGGTAG AAATCGCCGT 
CCTCCAACTG ATCCAGTGAA TGCTTTGTTA AGTTTTGCCT ATGGTTTATT ACGAGTTCAA 
GTCACTGCGG CTGTTCATAT TGCTGGTTTA GATCCTTATA TTGGTTATTT ACATGAAACC 
ACTCGCGGAC AACCTGCAAT GGTTCTAGAT TTAATGGAAG AATTTCGTCC TTTGATTGCG 
GATAGTTTGG TGTTATCAGT GATTAGTCAT AAAGAAATTA AACCAACAGA TTTTAACGAA 
AGTTTAGGAG CTTATCTTTT ATCAGATTCA GGAAGAAAAA CGTTTTTACA AGCTTTTGAA 
AGAAAATTAA ATACTGAGTT TAAACATCCA GTCTTTGGTT ATCAATGTAG TTATCGACGT 
TCCATTGAAT TACAAGCTCG TTTGTTCAGT CGTTATTTAC AAGAAAATAT TCCCTATAAA 
TCTTTGAGTT TACGATGA
 
Protein sequence
MSILYLTQPD AVLSKKQEAF HVALKQEDGS WKKQLIPAQT VEQIVLIGYP SITGEALCYA 
LELGIPVHYL SCFGKYLGSA LPGYSRNGQL RLAQYHVHDN EEQRLALVKT VVTGKIHNQY 
HVLYRYQQKD NPLKEHKQLV KSKTTLEQVR GVEGLAAKDY FNVFKLILDS QWNFNGRNRR 
PPTDPVNALL SFAYGLLRVQ VTAAVHIAGL DPYIGYLHET TRGQPAMVLD LMEEFRPLIA 
DSLVLSVISH KEIKPTDFNE SLGAYLLSDS GRKTFLQAFE RKLNTEFKHP VFGYQCSYRR 
SIELQARLFS RYLQENIPYK SLSLR