| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0461 |
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| Symbol | |
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| ID | 7101936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | - |
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| Start bp | 470235 |
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| End bp | 473822 |
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| Gene Length | 3588 bp |
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| Protein Length | 1195 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643473570 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002370713 |
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| Protein GI | 218245342 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTTA TTATTATTCG GGAAGAACAA GCAACAGAAA GCGGATTTAA TGCACTTTTA
ATGATTAATA ATCAAGAATA TTCTATCACG GTTTCTGACC CCTTTGAACC GCGAGAGGAA
AATCTTTTAG AATGGTATTT TGAGGGGTGG TTAGTAACTC CTATGTTGAA TACGGAAACT
GCTAAGAAAG CAGCCGATAG TGTCAACCAT TATGGACTGT CTTTATTTGA ACAGGTTTTT
AAATCCGATA TTAATGCCTA TGCTAATTAC TGTCAGTTAA GAGGTCATTT AAAAGATATT
CAGTTTGAAA TTAAAGGTAA AACGCCTGAG TTTCAATCGT TGCATTGGGA AGCGATGAAA
GATCCTGAGT TATCTCGTCC CTTTGCGGTC GATTGTTTGA TGACTCGTCG CTTGGTTAAA
CCGATTAATC TTAATATTAA TTTGCCCGTT TTTCCCGTTA TTAATCTATT AGCTGTAGTC
GCTAGACCGG ATGAAGATAG CGACATTGGT TATCGTACTA TTGCCCGTCC TTTAGTAGAA
TTAATTGATC AGGGGAATCT GAGGGTTAAT ATTGAGATTT TGCGTCCTGG GACTTACGAA
AGTCTCTGTA AACATTTGGA GGCAAAAGGG AGTAATTATT ACCATATTAT CCATTTTGAT
CTACATGGCG GTTTGATGAC TTATCAGGAG TTCCAAAAGG GAGTAGAAAA GAATCGCTAT
TTGTATCAAC GGGGTTACGG GTTGGAACAG TTAGAACCCT ATAACGGGGT GAAAGCTTTC
CTCTTTTTTG AAGGAGAAAA CAAAGGAAAA GCAGTTCCCG TTGAAGCTTC AGAGTTAACA
AGTTTACTTA CTGGGAAGAA TATTCCGGTT TGTATTCTCA ATGCTTGTCA ATCTGGCAAA
CAAATAAGGC TTGACAAAAT TGAAGAAAGG GACGATAATA AAGTTATAGT GGGAAAAGGT
GTGCCCCTAC AACATAGTAA TGAAACCAGT TTAAGTAGTC GTTTGATGCA AGCAGAAATG
CAGATGGTTG TTGGCATGGC CTATTCGGTG ACGGTTTCTG CGGCAAGGTT GATGATGCAA
GCGTTGTACA AGGAATTGTT TAATAGTAAA CCCATCACTG AAGCGATACG GTTAAGTCGG
TTGGAGTTGT ACAACAATAA AGGACGACAA GCTTATTTTA ATGAGATTAT TGATCTCGAA
GACTGGTTAC TTCCGGTGGT GTATAACAAT CAACCTGTTA ATTTTAATTT GCGGGAGATG
ACTCCCGAAG AAACGGAGGA ATATTACACC CAATTAGAAC AAGACTATCG CTTTCCTTTA
CCCGTTTATG GTTTTGTGGG ACGGGACTTA GAGATACTAA AAATAGAAAA GTCTTTGTTA
AAACACAATG TTCTGTTATT GCAGGGGATG GGAGGAACAG GAAAGACGAC TTTATTAAAC
TATCTGCGGG AATGGTGGTA TAGAACCCAT TATGCAAACA AGATCTTTTA TTTCGGTTAC
GATACGAAAG CTTGGACAGT TGATCAGATT TTGTTTGAGG TAGGACGGGG TATTTATAAC
AGGTTTGAGT TTGCCAAGTT TCAACCGATG GGAGACGCTG CAAAGTTAGG AAAATTGATC
ACAGACTTAC GCAGTAGTAA TCATATTTTG ATTTTAGACA ATTTAGAATC AGTCACGGGA
CAACCTTTGG CTATTCAGAA TACGTTAGAG AAAACCGAAC AGGAAAAACT GAAATATCTC
TTACAACGGT TGAAGGGTGG GAAGACAAAA ATTGTTTTGG GTTCTCGGAG TGAGGAAAGT
TGGTTAAAAG AGGTTTATAC GAATAATAAT ATTCGTTATC TCTATCCGTT ACAGGGGTTA
GATAAGGAGT CACGGACAGA ATTAGCAGAA AAAATCCTTG AGGCAACTAT TCCTAACCCG
AAGAAACGGG ATAAGGTGAA GGAAGATGAT AATTTTAAGC GGTTAATGAA GCTTTTAGCG
GGTTATCCTT TAGCGATGGA AGTTGTCTTA GGAAATTTGA AGACGCAAAC CCCCCAAGAA
ATACTCAACG GGTTACAGTT AGCGGATGTT AATTTAGATA CGGGAAGCGA AAATAAAACC
GAAAGTATCC TTAAGTGTGT AGAATATTCC CACAGCAACC TATCACCTGA CGCACAAAAG
TTATTACTCT GTTTAGCACC TTTTAGTAGT TTTATCAATC GGTTTTCAAT ACCCAACTAT
GTCCAAGAAT TACAAAAATT AGACCCCTTT CAAGATTATC CTTTTGATCA GTTTGAGGAT
GCTATCTCAG AAGCGATCCA TTGGGGTTTG TTGTCTCCCA TGTTGTTGGG TGATCCTCCA
CAACCCGATG AAGACTTATT AACTATTCAG CCTGTTTTTC CCTATTTTCT AAAGACTAAG
GTAAAAGAAT TAGACACAGC AACCCAAGAA GCATTACAAG AAGGGTTTAA GAATCATTAT
ATTGGTTTAG CTAGGTCTTA TTTTAATTTA TTGCAGTCAA AAGAACCCCA AAAGAGACAA
ATAGGGATAT TTTACTGTCG TTTAGAGTAT GAGAACCTGT TTACAGGGTT ACAAATTTGT
TTGGAGAAAC AGGAGACAAT TGATATTTAT CAGTGTTTAA CAACATATTT AGAGGTGATC
AATGACTATC AAAGTTGTCT CAAGTTAGAT GAGTTGGTTT GTAACGCAGT CCAAAATTAT
TCCCCCGCAG CAAAGGAAAC TCAGTTAGGG TTAGATATCG TTATTCCTTT TGTACAAAAA
GCCAATAATT ATTTACAACT ACAGCAATAT GAAGCAGCAA AAGACGCTTA TTTACAAAGT
ATTGAATTAC TGAATACTTT AAATAAGGTA GACGAACAGC AAAAACAAAG TAAACTAGCA
GCTATCTACC ACCAGTTAGG AATAGTAGCG CAAGAATTAC GCGAATGGGA AGAAGCGAGA
AACTATTACC AACAAGCTAT TGAATACAGT GATCGCTACT CTCAAGCAAG TACCTACCAC
CAGTTAGGAA TAGTAGCGCA AGAATTACGC GAATGGGAAG AAGCGAGAAA CTATTACCAA
CAAGCTTTGT CTATCAAAAT TGAATACAGC GATAGCTACT CTCAAGCAAG TACCTACCAA
CTGTTAGGAG TATTAGCGCA AGAATTACAC GAATGGGAAG AAGCGAGAAA GTATTACAAA
AAAGCTTTGT GTATCTTTAT TAAATACAGC GATCACTACT CTCAAGCAGG AATATGCCAC
AATTTAGGAG TATTAGCGCA AAAATTATGT CAATGGGAAC AAGCACAAAC CTATTACGAA
CAAGCTTTGT CTATTAAAAT TGAATACAGC GATCGCTACT CTCAAGCAAG AACCTACTAT
TGTTTAGGAA TGGTAGCAGA AGCAACAGGA AACCCCGAAG ATGCCAAAAA TTATTACTTA
CAAGCGTTAC AAATATGGGT GGAATTTAAC GATCAATACT GGGTAGAAAA TTCTATACAA
AATTTCAAGC GTTTTTATCA AGACAACCCC GATGACAGCA TTTTAGAGGG GGTTGCGTCT
ATTTTTAATA CAACGGTTGA GGAGATAAGA TCTGTTTTCA ATAATTAA
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| Protein sequence | MPVIIIREEQ ATESGFNALL MINNQEYSIT VSDPFEPREE NLLEWYFEGW LVTPMLNTET
AKKAADSVNH YGLSLFEQVF KSDINAYANY CQLRGHLKDI QFEIKGKTPE FQSLHWEAMK
DPELSRPFAV DCLMTRRLVK PINLNINLPV FPVINLLAVV ARPDEDSDIG YRTIARPLVE
LIDQGNLRVN IEILRPGTYE SLCKHLEAKG SNYYHIIHFD LHGGLMTYQE FQKGVEKNRY
LYQRGYGLEQ LEPYNGVKAF LFFEGENKGK AVPVEASELT SLLTGKNIPV CILNACQSGK
QIRLDKIEER DDNKVIVGKG VPLQHSNETS LSSRLMQAEM QMVVGMAYSV TVSAARLMMQ
ALYKELFNSK PITEAIRLSR LELYNNKGRQ AYFNEIIDLE DWLLPVVYNN QPVNFNLREM
TPEETEEYYT QLEQDYRFPL PVYGFVGRDL EILKIEKSLL KHNVLLLQGM GGTGKTTLLN
YLREWWYRTH YANKIFYFGY DTKAWTVDQI LFEVGRGIYN RFEFAKFQPM GDAAKLGKLI
TDLRSSNHIL ILDNLESVTG QPLAIQNTLE KTEQEKLKYL LQRLKGGKTK IVLGSRSEES
WLKEVYTNNN IRYLYPLQGL DKESRTELAE KILEATIPNP KKRDKVKEDD NFKRLMKLLA
GYPLAMEVVL GNLKTQTPQE ILNGLQLADV NLDTGSENKT ESILKCVEYS HSNLSPDAQK
LLLCLAPFSS FINRFSIPNY VQELQKLDPF QDYPFDQFED AISEAIHWGL LSPMLLGDPP
QPDEDLLTIQ PVFPYFLKTK VKELDTATQE ALQEGFKNHY IGLARSYFNL LQSKEPQKRQ
IGIFYCRLEY ENLFTGLQIC LEKQETIDIY QCLTTYLEVI NDYQSCLKLD ELVCNAVQNY
SPAAKETQLG LDIVIPFVQK ANNYLQLQQY EAAKDAYLQS IELLNTLNKV DEQQKQSKLA
AIYHQLGIVA QELREWEEAR NYYQQAIEYS DRYSQASTYH QLGIVAQELR EWEEARNYYQ
QALSIKIEYS DSYSQASTYQ LLGVLAQELH EWEEARKYYK KALCIFIKYS DHYSQAGICH
NLGVLAQKLC QWEQAQTYYE QALSIKIEYS DRYSQARTYY CLGMVAEATG NPEDAKNYYL
QALQIWVEFN DQYWVENSIQ NFKRFYQDNP DDSILEGVAS IFNTTVEEIR SVFNN
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