Gene PCC8801_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0445 
Symbol 
ID7105009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp451756 
End bp452355 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content43% 
IMG OID643473554 
ProductRhomboid family protein 
Protein accessionYP_002370697 
Protein GI218245326 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTA TGAATCACCA TCAAGAGAAT GGACTTTCCC GTGAGATGAA AACCCATGCC 
ACCATTTTAG GGGGATTTGT CGCCGTGTTT TGGATATCAG AACTCTTAGA TTTATTCGTT 
TTTCGAGGAG CCTTAAATCG ATTTGGCATT GTCCCCCATA ATCTTATCGG ATTACGGGGA 
ATTTTGTTTG CCCCCTTCCT CCATGGTAGC TTATCCCATT TAATCGGTAA TACCATTCCT 
TTCGTGGTTT TAGGCTGGTT TGTCATGCTC CAAGAAACCA GTGATTTTTG GATTGTGACA 
GGTTTAACCA TGCTCATCGG AGGGTTAGGA GTTTGGTTAT TTGGGGCTCC CGGTTCAGTC 
CATATCGGAG CCAGTATTCT CATTTTTGGC TATCTAGGAT TTTTGCTCTT ACGAGGCTAT 
TTTCAACGCA ACTTTGTCTC AATTTTTCTA TCAGTTTTGG TGGGATTTCT TTACGGAGGA 
TTAGTCTTAG GGGTCTTACC ATCTGCTCCG GGGATTTCTT GGCAAGGCCA TCTATTTGGC 
TTTCTGGGTG GGGTATTAGC TGCCAAATTA ATTGCCAACG AAAAACGCTA TTATTCTTAA
 
Protein sequence
MSVMNHHQEN GLSREMKTHA TILGGFVAVF WISELLDLFV FRGALNRFGI VPHNLIGLRG 
ILFAPFLHGS LSHLIGNTIP FVVLGWFVML QETSDFWIVT GLTMLIGGLG VWLFGAPGSV 
HIGASILIFG YLGFLLLRGY FQRNFVSIFL SVLVGFLYGG LVLGVLPSAP GISWQGHLFG 
FLGGVLAAKL IANEKRYYS