Gene PCC8801_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0425 
Symbol 
ID7105808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp428037 
End bp429572 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content39% 
IMG OID643473535 
ProductAll-trans-retinol 13,14-reductase 
Protein accessionYP_002370678 
Protein GI218245307 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGT TTGATTATAT TATTTTAGGA GCAGGATTAG GAGGACTTTC GACAGCAGCC 
TGTTTAACGA AACAAGGCAA ACGAGTCCTC GTGTTAGAAC AGCATTATTT ACCAGGAGGA
TGCTGTCATA CTTTCAATTA CGGAGATTAT AGTTTCTGCG CCGATGTCCA CTATATCTCC
AAATGTGGAC TAGGGGAAAC TATTCGTATA TTTCTCGACT ATATTAACCG AGCAGTGGCT
TTCAATTCCC TTGATCCTGA TTGTATTGAT CGAATTATTA CCCCAGAGGT TGAGTTTGCA
ATTCCTTTGG GGTGGGAGAA TCTCCGTCAG CGACTCTTAT CTACTTTTCC TGAAGAAAGC
ACGGCTATTA ACGATTATTG TGATGAAATT CAACGTCTTC ATCAGGAAAT TCGTAAATTT
TCCAGGGATA TTCGTTGGTT TGCTCAAAAG TGGTCAGATT GGTGGAAGTT GCCCAAATAT
TGGCATCTAT TTTCCCGACG CAATTGGACG TTACAAGATC TCTACGATCG TGTCGGACTT
TCGCCAAAAC TGCAAGCTAT ATTAGCGGGA CAAAGTGGTG ATTATGCGTT ACCTCCCAAT
CAAATTGCGT TAATTACTCA TACCTCTTTG GTGTGGGACT ATTCCCAAGG AGCTTACTAT
CCTAAGCATC ATTTTAAGGA TTTTGTTGAT ACGATCGCAG ATGCCATTAC CGCAAAAGGA
GGGGTTATTT TATATTCAAC CCCAGTAGAG TATATTGAGG TCAAAAACAA GAAAGTACAA
AGTATAACAG CCGCAGGAAA AACCTATCAA GCGACTCTAG ATTATATCAG TGATCTTGAC
CCAAAATTAA CAATACAGTT AATGCAAGAG GGGGCTAAAA GTTTGAGTCA ATCTGAGTAT
GACCGTTTAA CGAATTATGA GTATTCAGCG AGTGCTTTTA ATGTTTATTT AGGACTAGCA
GAAAGTTTTG ATCCTAAACA GTATAATCTG GGTAATTGGA ATATTTGGTA TTATCCTAAT
GGGGATCTTA ATCAAGCTTA TCACGAACAA TTCAACGGTC ATTTAGATCA TCCTTGGATT
TTTCTATCTT GTCCTACCCT AAAATCAACG GAACCGGGAA TGGCACCAGA AGGTAAACAT
ATTTTAGAGA TTGCAACTGT TTGTCCTTAT GAACCGTTTA AGTTACTTAA TGAAAACGAT
CAGACTGCTT ATAAAGCGAA AAAACGAGAG GTTTATCAAC AAATTATGAC CAGTGTGCGA
GATATTATTC CTGACATCGA TCACCATATT CGGATGAAGA TTTATGGCAC TCCTACCACC
AGTGAATATT ATCTAGGACA ACCTCAAGGT AATATTTATG GAGCTAAATT AATTCCTAAC
CAAATTGGAT TAAATCGTTT AGGCTATCGC ACAGAATTAG GGAACCTATT TTTAGTGGGT
GCGAGTGCGG GTTATCCTAG TGTACCAGGG GTCATTCGTA ATGGTTTAGA TGTTGTAGAA
TTGCTCACAG GTCAATCAAT TCGAGTGAAT AGTTAA
 
Protein sequence
METFDYIILG AGLGGLSTAA CLTKQGKRVL VLEQHYLPGG CCHTFNYGDY SFCADVHYIS 
KCGLGETIRI FLDYINRAVA FNSLDPDCID RIITPEVEFA IPLGWENLRQ RLLSTFPEES
TAINDYCDEI QRLHQEIRKF SRDIRWFAQK WSDWWKLPKY WHLFSRRNWT LQDLYDRVGL
SPKLQAILAG QSGDYALPPN QIALITHTSL VWDYSQGAYY PKHHFKDFVD TIADAITAKG
GVILYSTPVE YIEVKNKKVQ SITAAGKTYQ ATLDYISDLD PKLTIQLMQE GAKSLSQSEY
DRLTNYEYSA SAFNVYLGLA ESFDPKQYNL GNWNIWYYPN GDLNQAYHEQ FNGHLDHPWI
FLSCPTLKST EPGMAPEGKH ILEIATVCPY EPFKLLNEND QTAYKAKKRE VYQQIMTSVR
DIIPDIDHHI RMKIYGTPTT SEYYLGQPQG NIYGAKLIPN QIGLNRLGYR TELGNLFLVG
ASAGYPSVPG VIRNGLDVVE LLTGQSIRVN S